RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 DSC2Q02487 901 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 PEX6Q13608 980 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 CRTC2Q53ET0 693 aaPredicted RBP11.77□□□□□ -0.53
BRCA1-225ENST00000586385 LACTB2Q53H82 288 aaPredicted RBP11.77□□□□□ -0.53
BRCA1-225ENST00000586385 MARC1Q5VT66 337 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 ALG1LQ6GMV1 187 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 C16orf46Q6P387 395 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 CEACAM20Q6UY09 585 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 TMEM135Q86UB9 458 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 FAM26EQ8N5C1 309 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 ATPAF2Q8N5M1 289 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 ARRDC2Q8TBH0 407 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 KIAA1143Q96AT1 154 aaPredicted RBP11.77□□□□□ -0.53
BRCA1-225ENST00000586385 ZPBPQ9BS86 351 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 ZWILCHQ9H900 591 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 PCDH18Q9HCL0 1135 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.77□□□□□ -0.53
BRCA1-225ENST00000586385 SCHIP1Q9P0W5 487 aaPredicted RBP11.77□□□□□ -0.53
BRCA1-225ENST00000586385 VPS18Q9P253 973 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 CNOT8Q9UFF9 292 aaKnown RBP11.77□□□□□ -0.53
BRCA1-225ENST00000586385 KLHL3Q9UH77 587 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 ZNHIT2Q9UHR6 403 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 CHKBQ9Y259 395 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 ADGRG1Q9Y653 693 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 RPS6KL1Q9Y6S9 549 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 MN1Q10571 1320 aaPredicted RBP11.77□□□□□ -0.53
BRCA1-225ENST00000586385 NOTCH2Q04721 2471 aa11.77□□□□□ -0.53
BRCA1-225ENST00000586385 BLACEA4D250 179 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 LRRC53A6NM62 1247 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 CLDN7O95471 211 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 C9P02748 559 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 ANKRD34CP0C6C1 535 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 ACP5P13686 325 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 ZNF30P17039 623 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 DESP17661 470 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 MAPK9P45984 424 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 EPHA4P54764 986 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 MLLT10P55197 1068 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 CDH6P55285 790 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 UBE2IP63279 158 aaKnown RBP11.76□□□□□ -0.53
BRCA1-225ENST00000586385 NIPAL4Q0D2K0 466 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 MMRN1Q13201 1228 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 MAP7Q14244 749 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 HENMT1Q5T8I9 393 aaKnown RBP11.76□□□□□ -0.53
BRCA1-225ENST00000586385 CHST15Q7LFX5 561 aaPredicted RBP11.76□□□□□ -0.53
BRCA1-225ENST00000586385 EXD1Q8NHP7 514 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 LRRN4Q8WUT4 740 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 MAML1Q92585 1016 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 HSPH1Q92598 858 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 EID2BQ96D98 161 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 TDRD1Q9BXT4 1180 aaKnown RBP11.76□□□□□ -0.53
BRCA1-225ENST00000586385 ZMYND15Q9H091 742 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 HAUS4Q9H6D7 363 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 PRDM8Q9NQV8 689 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 LMBRD1Q9NUN5 540 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 DTLQ9NZJ0 730 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 CPNE7Q9UBL6 633 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 SLC30A1Q9Y6M5 507 aa11.76□□□□□ -0.53
BRCA1-225ENST00000586385 LILRA5A6NI73 299 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 POLR1CO15160 346 aaPredicted RBP11.75□□□□□ -0.53
BRCA1-225ENST00000586385 MFSD11O43934 449 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 ASMTLO95671 621 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 CD48P09326 243 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 GZMAP12544 262 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 F3P13726 295 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 TCN2P20062 427 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 NFKBIAP25963 317 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 ARL4AP40617 200 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 UQCRFS1P47985 274 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 SH3BP2P78314 561 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 MYL5Q02045 173 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 SLC25A11Q02978 314 aaKnown RBP11.75□□□□□ -0.53
BRCA1-225ENST00000586385 BOLA3Q53S33 107 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 FAM182AQ5T1J6 154 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 ZNF648Q5T619 568 aaPredicted RBP11.75□□□□□ -0.53
BRCA1-225ENST00000586385 LYSMD3Q7Z3D4 306 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 KDELC2Q7Z4H8 507 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.75□□□□□ -0.53
BRCA1-225ENST00000586385 ESX1Q8N693 406 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 ZNF653Q96CK0 615 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 BTBD6Q96KE9 485 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 C9orf72Q96LT7 481 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 PLEKHG4BQ96PX9 1271 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 LYSMD1Q96S90 227 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 HERPUD2Q9BSE4 406 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 EFHD1Q9BUP0 239 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 TRIT1Q9H3H1 467 aaKnown RBP11.75□□□□□ -0.53
BRCA1-225ENST00000586385 ARFGAP3Q9NP61 516 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 CHMP5Q9NZZ3 219 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 MYO1AQ9UBC5 1043 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 CROTQ9UKG9 612 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 MYO6Q9UM54 1294 aa11.75□□□□□ -0.53
BRCA1-225ENST00000586385 KIR2DS5A0A0G2JLQ3 304 aa11.74□□□□□ -0.53
BRCA1-225ENST00000586385 A0A0G2JNG1 304 aa11.74□□□□□ -0.53
BRCA1-225ENST00000586385 KIR2DS3K7RE56 304 aa11.74□□□□□ -0.53
BRCA1-225ENST00000586385 SNX2O60749 519 aa11.74□□□□□ -0.53
BRCA1-225ENST00000586385 PYGLP06737 847 aa11.74□□□□□ -0.53
BRCA1-225ENST00000586385 KRT7P08729 469 aa11.74□□□□□ -0.53
BRCA1-225ENST00000586385 RNF224P0DH78 156 aa11.74□□□□□ -0.53
BRCA1-225ENST00000586385 ZNF8P17098 575 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms