RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 EEF1DP29692 281 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 MRPL19P49406 292 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 DIO3P55073 304 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 EFEMP1Q12805 493 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 ATP6AP1Q15904 470 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 RAP1GAP2Q684P5 730 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 TTC33Q6PID6 262 aaPredicted RBP14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 TMEM125Q96AQ2 219 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 ADAM2Q99965 735 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 DERL2Q9GZP9 239 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 MUC13Q9H3R2 512 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 LIN28AQ9H9Z2 209 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 SYTL2Q9HCH5 934 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 C8orf4Q9NR00 106 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 GMIPQ9P107 970 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 CLEC11AQ9Y240 323 aa14.13□□□□□ -0.15
CDK5RAP3-237ENST00000585163 RNF103-CHMP3A0A140T963 221 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 ACOX3O15254 700 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 TPST1O60507 370 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 RASAL1O95294 804 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 GPR15P49685 360 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 FKBP1BP68106 108 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 GRIK2Q13002 908 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 RCAN2Q14206 197 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 GALNT3Q14435 633 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 SPRED1Q7Z699 444 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 PTRH1Q86Y79 214 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 ZNF786Q8N393 782 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 FBXO39Q8N4B4 442 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 C8orf48Q96LL4 319 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 ALG2Q9H553 416 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 SEMA4BQ9NPR2 832 aaPredicted RBP14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 INTS10Q9NVR2 710 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 OAZ3Q9UMX2 235 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 MED16Q9Y2X0 877 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 OAS3Q9Y6K5 1087 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 CROCCQ5TZA2 2017 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 LCHNA4D1U4 455 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 SUPT3HB4E1H0 165 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 SUPT3HO75486 399 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 TBX18O95935 607 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 FCGR1AP12314 374 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 THPOP40225 353 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 RANBP1P43487 201 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 ESRRGP62508 458 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 SETMARQ53H47 684 aaPredicted RBP14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 TMTC4Q5T4D3 741 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 PAQR3Q6TCH7 311 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 SPATA19Q7Z5L4 167 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 CDKN2AIPNLQ96HQ2 116 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 FUBP3Q96I24 572 aaKnown RBP eCLIP14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 ZNF599Q96NL3 588 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 TRIM8Q9BZR9 551 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 RNF112Q9ULX5 631 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 ANKRD36A6QL64 1941 aa14.12□□□□□ -0.15
CDK5RAP3-237ENST00000585163 ZNF701M0R085 212 aaPredicted RBP14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 PRAMEF11O60813 436 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 OAZ2O95190 189 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 CYBBP04839 570 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 RPS17P08708 135 aaKnown RBP14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 PIRTP0C851 137 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 OR1E1P30953 314 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 ACVRL1P37023 503 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 ZFP36L2P47974 494 aaKnown RBP14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 GSK3BP49841 420 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 APLP1P51693 650 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 YBEYP58557 167 aaPredicted RBP14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 ECT2LQ008S8 904 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 LPIN1Q14693 890 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 TRIP4Q15650 581 aaPredicted RBP14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 CYP51A1Q16850 503 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 TBC1D25Q3MII6 688 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 ZBED5Q49AG3 693 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 ANKS6Q68DC2 871 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 DHRS4L2Q6PKH6 230 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 GPR141Q7Z602 305 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 CIR1Q86X95 450 aaPredicted RBP14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 DNAJB14Q8TBM8 379 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 SEPT8Q92599 483 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 GFM2Q969S9 779 aaKnown RBP14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 RPRD1AQ96P16 312 aaPredicted RBP14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 MUC3BQ9H195 1237 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 CD320Q9NPF0 282 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 TAS2R13Q9NYV9 303 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 CEP350Q5VT06 3117 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 TCRBV5S2A0A599 114 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 IQCA1LA6NCM1 817 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 ASPDHA6ND91 283 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 GLTPD2A6NH11 291 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 ECI2O75521 394 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 RPLP2P05387 115 aaKnown RBP14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 PRSS56P0CW18 603 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 GRK4P32298 578 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 KCNK10P57789 538 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 NFYCQ13952 458 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 ZNF235Q14590 738 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 RABL3Q5HYI8 236 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 VPS33AQ96AX1 596 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 TEX37Q96LM6 180 aa14.11□□□□□ -0.15
CDK5RAP3-237ENST00000585163 C1QTNF3Q9BXJ4 246 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms