RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 ZFC3H1O60293 1989 aaKnown RBP20.27■□□□□ 0.84
TOP3A-219ENST00000584887 IGHV1OR21-1A0A087WYE8 117 aa20.27■□□□□ 0.84
TOP3A-219ENST00000584887 HGSO14964 777 aaPredicted RBP20.27■□□□□ 0.84
TOP3A-219ENST00000584887 CBFA2T2O43439 604 aa20.27■□□□□ 0.84
TOP3A-219ENST00000584887 KRT1P04264 644 aa20.27■□□□□ 0.84
TOP3A-219ENST00000584887 TPM1P09493 284 aa20.27■□□□□ 0.84
TOP3A-219ENST00000584887 ACP5P13686 325 aa20.27■□□□□ 0.84
TOP3A-219ENST00000584887 TNNT1P13805 278 aa20.27■□□□□ 0.84
TOP3A-219ENST00000584887 SPINT3P49223 89 aa20.27■□□□□ 0.84
TOP3A-219ENST00000584887 PPIDQ08752 370 aaKnown RBP20.27■□□□□ 0.84
TOP3A-219ENST00000584887 ZBTB17Q13105 803 aa20.27■□□□□ 0.84
TOP3A-219ENST00000584887 TRIM14Q14142 442 aa20.27■□□□□ 0.84
TOP3A-219ENST00000584887 ODF2Q5BJF6 829 aa20.27■□□□□ 0.84
TOP3A-219ENST00000584887 ALS2CLQ60I27 953 aa20.27■□□□□ 0.84
TOP3A-219ENST00000584887 CHST15Q7LFX5 561 aaPredicted RBP20.27■□□□□ 0.84
TOP3A-219ENST00000584887 SLC35G2Q8TBE7 412 aa20.27■□□□□ 0.84
TOP3A-219ENST00000584887 DNAJC7Q99615 494 aa20.27■□□□□ 0.84
TOP3A-219ENST00000584887 SLC38A3Q99624 504 aa20.27■□□□□ 0.84
TOP3A-219ENST00000584887 MAK16Q9BXY0 300 aaKnown RBP20.27■□□□□ 0.84
TOP3A-219ENST00000584887 ADGRE3Q9BY15 652 aa20.27■□□□□ 0.84
TOP3A-219ENST00000584887 SPTLC3Q9NUV7 552 aa20.27■□□□□ 0.84
TOP3A-219ENST00000584887 TMEM9Q9P0T7 183 aa20.27■□□□□ 0.84
TOP3A-219ENST00000584887 KCNK6Q9Y257 313 aa20.27■□□□□ 0.84
TOP3A-219ENST00000584887 FADS2P1A8MWK0 482 aa20.26■□□□□ 0.83
TOP3A-219ENST00000584887 APOL1O14791 398 aa20.26■□□□□ 0.83
TOP3A-219ENST00000584887 SNX2O60749 519 aa20.26■□□□□ 0.83
TOP3A-219ENST00000584887 MMP2P08253 660 aa20.26■□□□□ 0.83
TOP3A-219ENST00000584887 CSTF2P33240 577 aaKnown RBP eCLIP20.26■□□□□ 0.83
TOP3A-219ENST00000584887 LIMK2P53671 638 aa20.26■□□□□ 0.83
TOP3A-219ENST00000584887 IFI35P80217 286 aaPredicted RBP20.26■□□□□ 0.83
TOP3A-219ENST00000584887 SNAP47Q5SQN1 464 aa20.26■□□□□ 0.83
TOP3A-219ENST00000584887 LYSMD3Q7Z3D4 306 aa20.26■□□□□ 0.83
TOP3A-219ENST00000584887 RFX6Q8HWS3 928 aa20.26■□□□□ 0.83
TOP3A-219ENST00000584887 PLD5Q8N7P1 536 aa20.26■□□□□ 0.83
TOP3A-219ENST00000584887 CNTD1Q8N815 330 aa20.26■□□□□ 0.83
TOP3A-219ENST00000584887 OR4D9Q8NGE8 314 aa20.26■□□□□ 0.83
TOP3A-219ENST00000584887 MED8Q96G25 268 aa20.26■□□□□ 0.83
TOP3A-219ENST00000584887 LYSMD1Q96S90 227 aa20.26■□□□□ 0.83
TOP3A-219ENST00000584887 ARFGAP3Q9NP61 516 aa20.26■□□□□ 0.83
TOP3A-219ENST00000584887 VPS18Q9P253 973 aa20.26■□□□□ 0.83
TOP3A-219ENST00000584887 PCYT1BQ9Y5K3 369 aaPredicted RBP20.26■□□□□ 0.83
TOP3A-219ENST00000584887 SSU72P8A0A1W2PR75 194 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 ANKRD66B4E2M5 251 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 DNAJC6O75061 913 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 EML2O95834 649 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 PIRTP0C851 137 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 CD82P27701 267 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 MAPK9P45984 424 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 DYNLT1P63172 113 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 NFATC2Q13469 925 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 PCSK7Q16549 785 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 ASTE1Q2TB18 679 aaPredicted RBP20.25■□□□□ 0.83
TOP3A-219ENST00000584887 HENMT1Q5T8I9 393 aaKnown RBP20.25■□□□□ 0.83
TOP3A-219ENST00000584887 NPNTQ6UXI9 565 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 B4GALNT4Q76KP1 1039 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 FAM129CQ86XR2 697 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 SFRP1Q8N474 314 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 ZSCAN1Q8NBB4 408 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 AGBL5Q8NDL9 886 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 CCDC112Q8NEF3 446 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 OR10G6Q8NH81 332 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 ART4Q93070 314 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 PMEPA1Q969W9 287 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 AGAP3Q96P47 875 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 TAAR9Q96RI9 348 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 WDR24Q96S15 920 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 ARHGAP9Q9BRR9 750 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 BRD8Q9H0E9 1235 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 CNOT6Q9ULM6 557 aaKnown RBP20.25■□□□□ 0.83
TOP3A-219ENST00000584887 PCDHGA4Q9Y5G9 962 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 SPTA1P02549 2419 aa20.25■□□□□ 0.83
TOP3A-219ENST00000584887 ATMQ13315 3056 aa20.24■□□□□ 0.83
TOP3A-219ENST00000584887 DUX1O43812 170 aa20.24■□□□□ 0.83
TOP3A-219ENST00000584887 THRAP10827 490 aa20.24■□□□□ 0.83
TOP3A-219ENST00000584887 FGF3P11487 239 aaPredicted RBP20.24■□□□□ 0.83
TOP3A-219ENST00000584887 HHEXQ03014 270 aa20.24■□□□□ 0.83
TOP3A-219ENST00000584887 TRA2AQ13595 282 aaKnown RBP eCLIP20.24■□□□□ 0.83
TOP3A-219ENST00000584887 PDK1Q15118 436 aa20.24■□□□□ 0.83
TOP3A-219ENST00000584887 EXTL1Q92935 676 aa20.24■□□□□ 0.83
TOP3A-219ENST00000584887 RNF25Q96BH1 459 aaPredicted RBP20.24■□□□□ 0.83
TOP3A-219ENST00000584887 CCDC42Q96M95 316 aa20.24■□□□□ 0.83
TOP3A-219ENST00000584887 DPYSL5Q9BPU6 564 aa20.24■□□□□ 0.83
TOP3A-219ENST00000584887 SPATA16Q9BXB7 569 aa20.24■□□□□ 0.83
TOP3A-219ENST00000584887 STN1Q9H668 368 aaKnown RBP20.24■□□□□ 0.83
TOP3A-219ENST00000584887 SLC39A1Q9NY26 324 aa20.24■□□□□ 0.83
TOP3A-219ENST00000584887 TBC1D29Q9UFV1 150 aa20.24■□□□□ 0.83
TOP3A-219ENST00000584887 SHOC2Q9UQ13 582 aa20.24■□□□□ 0.83
TOP3A-219ENST00000584887 EFCAB7A8K855 629 aa20.23■□□□□ 0.83
TOP3A-219ENST00000584887 A8MU76 341 aa20.23■□□□□ 0.83
TOP3A-219ENST00000584887 STMND1H3BQB6 276 aa20.23■□□□□ 0.83
TOP3A-219ENST00000584887 PPP1R12AO14974 1030 aaPredicted RBP20.23■□□□□ 0.83
TOP3A-219ENST00000584887 PTMSP20962 102 aa20.23■□□□□ 0.83
TOP3A-219ENST00000584887 FASLGP48023 281 aa20.23■□□□□ 0.83
TOP3A-219ENST00000584887 ATP1A2P50993 1020 aa20.23■□□□□ 0.83
TOP3A-219ENST00000584887 GPLD1P80108 840 aa20.23■□□□□ 0.83
TOP3A-219ENST00000584887 SDK2Q58EX2 2172 aa20.23■□□□□ 0.83
TOP3A-219ENST00000584887 ZNF569Q5MCW4 686 aa20.23■□□□□ 0.83
TOP3A-219ENST00000584887 ZNF648Q5T619 568 aaPredicted RBP20.23■□□□□ 0.83
TOP3A-219ENST00000584887 SLC9A4Q6AI14 798 aa20.23■□□□□ 0.83
TOP3A-219ENST00000584887 NT5DC3Q86UY8 548 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms