RNA–Protein interactions for RNA: ENST00000584692.1

RHOT1-216, Transcript of ras homolog family member T1, human

TSL 2

Gene RHOT1, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RHOT1-216	ENST00000584692	POLR3GL	Q9BT43	218 aa		4.76	□□□□□ -1.65
RHOT1-216	ENST00000584692	CSTL1	Q9H114	145 aa		4.76	□□□□□ -1.65
RHOT1-216	ENST00000584692	MAGIX	Q9H6Y5	334 aa		4.76	□□□□□ -1.65
RHOT1-216	ENST00000584692	UBA2	Q9UBT2	640 aa	Predicted RBP	4.76	□□□□□ -1.65
RHOT1-216	ENST00000584692	PCDHAC2	Q9Y5I4	1007 aa		4.76	□□□□□ -1.65
RHOT1-216	ENST00000584692	C1orf226	A1L170	272 aa		4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	BMPR1B	O00238	502 aa		4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	SCAMP1	O15126	338 aa		4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	NDUFS3	O75489	264 aa		4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	DAB1	O75553	588 aa		4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	ZNF432	O94892	652 aa		4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	CDH1	P12830	882 aa		4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	MYOD1	P15172	320 aa		4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	ITGA2	P17301	1181 aa		4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	AMD1	P17707	334 aa		4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	TNFAIP3	P21580	790 aa		4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	APOBEC1	P41238	236 aa	Known RBP	4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	MRPS34	P82930	218 aa	Known RBP	4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	MED22	Q15528	200 aa		4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	C9orf50	Q5SZB4	431 aa		4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	GPATCH4	Q5T3I0	446 aa	Known RBP	4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	SNX30	Q5VWJ9	437 aa		4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	LCN10	Q6JVE6	187 aa		4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	KMT5C	Q86Y97	462 aa		4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	OR5R1	Q8NH85	324 aa		4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	PIGT	Q969N2	578 aa		4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	FEM1C	Q96JP0	617 aa		4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	QRFPR	Q96P65	431 aa		4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	LRRC4	Q9HBW1	653 aa		4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	CWC15	Q9P013	229 aa	Known RBP	4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	CLIC4	Q9Y696	253 aa		4.75	□□□□□ -1.65
RHOT1-216	ENST00000584692	PTPRC	P08575	1304 aa		4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692		A0A1W2PS18	150 aa		4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692	KCNN4	O15554	427 aa		4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692	USO1	O60763	962 aa	Known RBP	4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692	SCGB1D1	O95968	90 aa		4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692	UGT1A1	P22309	533 aa		4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692	NFKBIA	P25963	317 aa		4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692	TAS2R40	P59535	323 aa		4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692	ARL16	Q0P5N6	197 aa		4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692	MAD2L1	Q13257	205 aa	Predicted RBP	4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692	KRT32	Q14532	448 aa		4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692	HAUS3	Q68CZ6	603 aa		4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692	C18orf63	Q68DL7	685 aa		4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692	ASB18	Q6ZVZ8	466 aa		4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692	SMIM29	Q86T20	159 aa		4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692	TSPAN33	Q86UF1	283 aa		4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692	MUC20	Q8N307	709 aa	Predicted RBP	4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692	NGEF	Q8N5V2	710 aa		4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692	ACVR1C	Q8NER5	493 aa		4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692	BBS10	Q8TAM1	723 aa		4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692	DNASE2B	Q8WZ79	361 aa		4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692	CD101	Q93033	1021 aa		4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692	SMC4	Q9NTJ3	1288 aa		4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692	OR14J1	Q9UGF5	321 aa		4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692	ZNF711	Q9Y462	761 aa		4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692	TCF20	Q9UGU0	1960 aa	Known RBP	4.74	□□□□□ -1.65
RHOT1-216	ENST00000584692	ASPDH	A6ND91	283 aa		4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	PGPEP1L	A6NFU8	196 aa		4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	FAM90A26	D6RGX4	464 aa		4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	RNASEH2A	O75792	299 aa	Known RBP	4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	GNL1	P36915	607 aa	Predicted RBP	4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	PRCP	P42785	496 aa		4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	CLDN20	P56880	219 aa		4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	DCAF7	P61962	342 aa		4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	TFAP4	Q01664	338 aa		4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	ZNF234	Q14588	700 aa		4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	PNLIPRP3	Q17RR3	467 aa		4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	MYLK3	Q32MK0	819 aa		4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	ZNF805	Q5CZA5	627 aa		4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	ZNF628	Q5EBL2	1059 aa		4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	PAPD4	Q6PIY7	484 aa	Known RBP	4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	SARM1	Q6SZW1	724 aa		4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	RSRC2	Q7L4I2	434 aa	Known RBP	4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	HACE1	Q8IYU2	909 aa		4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	HMGCLL1	Q8TB92	370 aa		4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	C1orf74	Q96LT6	269 aa		4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	SYT17	Q9BSW7	474 aa		4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	ITPA	Q9BY32	194 aa		4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	SIL1	Q9H173	461 aa		4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	RRP7BP	Q9NSQ0	103 aa		4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	COPG2	Q9UBF2	871 aa		4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	FBXW11	Q9UKB1	542 aa		4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	FBXL2	Q9UKC9	423 aa		4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	POU2F3	Q9UKI9	436 aa		4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	RALY	Q9UKM9	306 aa	Known RBP	4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	DLGAP4	Q9Y2H0	992 aa		4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	OR2W1	Q9Y3N9	320 aa		4.73	□□□□□ -1.65
RHOT1-216	ENST00000584692	PI4KAP2	A4QPH2	592 aa		4.72	□□□□□ -1.65
RHOT1-216	ENST00000584692		A8MZ25	164 aa		4.72	□□□□□ -1.65
RHOT1-216	ENST00000584692	HS3ST1	O14792	307 aa		4.72	□□□□□ -1.65
RHOT1-216	ENST00000584692	ATP2A1	O14983	1001 aa		4.72	□□□□□ -1.65
RHOT1-216	ENST00000584692	BAIAP3	O94812	1187 aa		4.72	□□□□□ -1.65
RHOT1-216	ENST00000584692	IGLV2-11	P01706	119 aa		4.72	□□□□□ -1.65
RHOT1-216	ENST00000584692	MT3	P25713	68 aa		4.72	□□□□□ -1.65
RHOT1-216	ENST00000584692	IL15	P40933	162 aa	Predicted RBP	4.72	□□□□□ -1.65
RHOT1-216	ENST00000584692	EEF1A1	P68104	462 aa	Known RBP	4.72	□□□□□ -1.65
RHOT1-216	ENST00000584692	SET	Q01105	290 aa	Predicted RBP	4.72	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms