RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 ZRSR2Q15696 482 aaKnown RBP9.25□□□□□ -0.93
SS18-220ENST00000582092 PTPRNQ16849 979 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 LACTB2Q53H82 288 aaPredicted RBP9.25□□□□□ -0.93
SS18-220ENST00000582092 DGKKQ5KSL6 1271 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 RBM20Q5T481 1227 aaKnown RBP9.25□□□□□ -0.93
SS18-220ENST00000582092 LIPMQ5VYY2 423 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 PTRHD1Q6GMV3 140 aaKnown RBP9.25□□□□□ -0.93
SS18-220ENST00000582092 ZC3H14Q6PJT7 736 aaKnown RBP9.25□□□□□ -0.93
SS18-220ENST00000582092 GDPD4Q6W3E5 623 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 LYSMD3Q7Z3D4 306 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 CLEC14AQ86T13 490 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 CEP97Q8IW35 865 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 PLPP6Q8IY26 295 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 KIRREL3Q8IZU9 778 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 PLD6Q8N2A8 252 aaKnown RBP9.25□□□□□ -0.93
SS18-220ENST00000582092 FSTL5Q8N475 847 aaPredicted RBP9.25□□□□□ -0.93
SS18-220ENST00000582092 CPA6Q8N4T0 437 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 NKAPQ8N5F7 415 aaKnown RBP9.25□□□□□ -0.93
SS18-220ENST00000582092 CCNYL1Q8N7R7 359 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 PJA1Q8NG27 643 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 PIWIL2Q8TC59 973 aaKnown RBP9.25□□□□□ -0.93
SS18-220ENST00000582092 HEXDCQ8WVB3 486 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 FAM3CQ92520 227 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 CCT6BQ92526 530 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 IER2Q9BTL4 223 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 TMEM120AQ9BXJ8 343 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 CLPBQ9H078 707 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 POPDC3Q9HBV1 291 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 SARS2Q9NP81 518 aaKnown RBP9.25□□□□□ -0.93
SS18-220ENST00000582092 LTB4R2Q9NPC1 389 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 HEBP1Q9NRV9 189 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 PKD2L2Q9NZM6 624 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 NCKIPSDQ9NZQ3 722 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 MARK1Q9P0L2 795 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 MARCH4Q9P2E8 410 aaPredicted RBP9.25□□□□□ -0.93
SS18-220ENST00000582092 HEY2Q9UBP5 337 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 CRLS1Q9UJA2 301 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 TRMT6Q9UJA5 497 aaKnown RBP9.25□□□□□ -0.93
SS18-220ENST00000582092 INTS6Q9UL03 887 aaKnown RBP9.25□□□□□ -0.93
SS18-220ENST00000582092 EMCNQ9ULC0 261 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 DNAJC16Q9Y2G8 782 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 CACNA1IQ9P0X4 2223 aa9.25□□□□□ -0.93
SS18-220ENST00000582092 PABPN1LA6NDY0 278 aaKnown RBP9.24□□□□□ -0.93
SS18-220ENST00000582092 A8MX80 341 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 ANKRD65E5RJM6 399 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 SLCO1B7G3V0H7 640 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 H0Y858 1186 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 H3BMM5 538 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 AURKAO14965 403 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 HTRA2O43464 458 aaPredicted RBP9.24□□□□□ -0.93
SS18-220ENST00000582092 UBOX5O94941 541 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 UGT2B4P06133 528 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 ALPIP09923 528 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 TPBGLP0DKB5 382 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 FGF3P11487 239 aaPredicted RBP9.24□□□□□ -0.93
SS18-220ENST00000582092 PKMP14618 531 aaKnown RBP9.24□□□□□ -0.93
SS18-220ENST00000582092 TFEBP19484 476 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 HNF1BP35680 557 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 SPAM1P38567 509 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 LIG3P49916 1009 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 CCNHP51946 323 aaPredicted RBP9.24□□□□□ -0.93
SS18-220ENST00000582092 HK2P52789 917 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 AQP5P55064 265 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 LRRC32Q14392 662 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 ZNF460Q14592 562 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 TYSND1Q2T9J0 566 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 GPR33Q49SQ1 333 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 FNDC3BQ53EP0 1204 aaKnown RBP9.24□□□□□ -0.93
SS18-220ENST00000582092 BRAT1Q6PJG6 821 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 RALGPS2Q86X27 583 aaPredicted RBP9.24□□□□□ -0.93
SS18-220ENST00000582092 TTC30BQ8N4P2 665 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 PRSS33Q8NF86 280 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 RFWD2Q8NHY2 731 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 C10orf82Q8WW14 230 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 PIH1D2Q8WWB5 315 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 ULK4Q96C45 1275 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 SGF29Q96ES7 293 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 C19orf43Q9BQ61 176 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 MCMBPQ9BTE3 642 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 AARSD1Q9BTE6 412 aaKnown RBP9.24□□□□□ -0.93
SS18-220ENST00000582092 OSBPL1AQ9BXW6 950 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 ASB8Q9H765 288 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 ECT2Q9H8V3 914 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 OXSMQ9NWU1 459 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 XPR1Q9UBH6 696 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 MARCOQ9UEW3 520 aaPredicted RBP9.24□□□□□ -0.93
SS18-220ENST00000582092 SLCO3A1Q9UIG8 710 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 PCDHB1Q9Y5F3 818 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 CAPN7Q9Y6W3 813 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 PIAS3Q9Y6X2 628 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 CHD5Q8TDI0 1954 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 TRIOO75962 3097 aa9.24□□□□□ -0.93
SS18-220ENST00000582092 GLYATL1P3A0A0U1RQE8 302 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 TBC1D3BA6NDS4 549 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 CAPN8A6NHC0 703 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 SYCE1LA8MT33 242 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 H7C0S8 307 aa9.23□□□□□ -0.93
SS18-220ENST00000582092 NRG2O14511 850 aaPredicted RBP9.23□□□□□ -0.93
SS18-220ENST00000582092 TRAFD1O14545 582 aaPredicted RBP9.23□□□□□ -0.93
SS18-220ENST00000582092 LAMTOR5O43504 91 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms