RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 UFM1P61960 85 aa13.63□□□□□ -0.23
RNF43-205ENST00000581868 MAPRE1Q15691 268 aaKnown RBP13.63□□□□□ -0.23
RNF43-205ENST00000581868 TMTC4Q5T4D3 741 aa13.63□□□□□ -0.23
RNF43-205ENST00000581868 OR4L1Q8NH43 312 aa13.63□□□□□ -0.23
RNF43-205ENST00000581868 SEPT8Q92599 483 aa13.63□□□□□ -0.23
RNF43-205ENST00000581868 GFM2Q969S9 779 aaKnown RBP13.63□□□□□ -0.23
RNF43-205ENST00000581868 C1orf74Q96LT6 269 aa13.63□□□□□ -0.23
RNF43-205ENST00000581868 PTPN18Q99952 460 aa13.63□□□□□ -0.23
RNF43-205ENST00000581868 POLR1BQ9H9Y6 1135 aa13.63□□□□□ -0.23
RNF43-205ENST00000581868 CATSPERZQ9NTU4 200 aa13.63□□□□□ -0.23
RNF43-205ENST00000581868 SLC45A1Q9Y2W3 748 aa13.63□□□□□ -0.23
RNF43-205ENST00000581868 TDRKHQ9Y2W6 561 aaKnown RBP13.63□□□□□ -0.23
RNF43-205ENST00000581868 GPR45Q9Y5Y3 372 aa13.63□□□□□ -0.23
RNF43-205ENST00000581868 LOC285095A0A1B0GVY8 99 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 MYADML2A6NDP7 307 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 ENPP3O14638 875 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 MGEA5O60502 916 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 KPNA6O60684 536 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 SNAP29O95721 258 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 CYBBP04839 570 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 VARSP26640 1264 aaKnown RBP13.62□□□□□ -0.23
RNF43-205ENST00000581868 CD52P31358 61 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 ACVRL1P37023 503 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 AGTR2P50052 363 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 MAPK10P53779 464 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 LCP2Q13094 533 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 POLD3Q15054 466 aaPredicted RBP13.62□□□□□ -0.23
RNF43-205ENST00000581868 TSNQ15631 228 aaKnown RBP13.62□□□□□ -0.23
RNF43-205ENST00000581868 DUS1LQ6P1R4 473 aaKnown RBP13.62□□□□□ -0.23
RNF43-205ENST00000581868 ABRAXAS1Q6UWZ7 409 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 SPRED1Q7Z699 444 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 DCBLD1Q8N8Z6 715 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 ZC3H15Q8WU90 426 aaKnown RBP13.62□□□□□ -0.23
RNF43-205ENST00000581868 LZICQ8WZA0 190 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 ACOX2Q99424 681 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 PARK7Q99497 189 aaKnown RBP13.62□□□□□ -0.23
RNF43-205ENST00000581868 PLGRKTQ9HBL7 147 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 SLC52A3Q9NQ40 469 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 PRDM5Q9NQX1 630 aaPredicted RBP13.62□□□□□ -0.23
RNF43-205ENST00000581868 PTBP2Q9UKA9 531 aaKnown RBP13.62□□□□□ -0.23
RNF43-205ENST00000581868 TLR6Q9Y2C9 796 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 DICER1Q9UPY3 1922 aaKnown RBP13.62□□□□□ -0.23
RNF43-205ENST00000581868 TANC1Q9C0D5 1861 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 A0A1W2PP18 115 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 ASPDHA6ND91 283 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 CDC7O00311 574 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 MUSKO15146 869 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 RPP40O75818 363 aaKnown RBP13.62□□□□□ -0.23
RNF43-205ENST00000581868 GPIP06744 558 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 HNRNPCP07910 306 aaKnown RBP eCLIP13.62□□□□□ -0.234e-8■■□□□ 11.8
RNF43-205ENST00000581868 MAP2K5Q13163 448 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 NEDD8Q15843 81 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 TIGD2Q4W5G0 525 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 C9orf131Q5VYM1 1079 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 FBXL22Q6P050 247 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 MSANTD2Q6P1R3 559 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 LYSMD3Q7Z3D4 306 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 FNDC8Q8TC99 324 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 THAP11Q96EK4 314 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 AARSD1Q9BTE6 412 aaKnown RBP13.62□□□□□ -0.23
RNF43-205ENST00000581868 NAA50Q9GZZ1 169 aaKnown RBP13.62□□□□□ -0.23
RNF43-205ENST00000581868 HIPK3Q9H422 1215 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 TFB2MQ9H5Q4 396 aaKnown RBP13.62□□□□□ -0.23
RNF43-205ENST00000581868 TMEM248Q9NWD8 314 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 SMPD3Q9NY59 655 aaPredicted RBP13.62□□□□□ -0.23
RNF43-205ENST00000581868 ANAPC2Q9UJX6 822 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 OAS3Q9Y6K5 1087 aaKnown RBP13.62□□□□□ -0.23
RNF43-205ENST00000581868 ANKRD12Q6UB98 2062 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 DOCK3Q8IZD9 2030 aa13.62□□□□□ -0.23
RNF43-205ENST00000581868 CCDC154A6NI56 674 aa13.61□□□□□ -0.23
RNF43-205ENST00000581868 TRIM64CA6NLI5 447 aa13.61□□□□□ -0.23
RNF43-205ENST00000581868 M0QZQ0 153 aa13.61□□□□□ -0.23
RNF43-205ENST00000581868 ECI2O75521 394 aa13.61□□□□□ -0.23
RNF43-205ENST00000581868 RFC2P35250 354 aa13.61□□□□□ -0.23
RNF43-205ENST00000581868 CAPGP40121 348 aa13.61□□□□□ -0.23
RNF43-205ENST00000581868 RPS9P46781 194 aaKnown RBP13.61□□□□□ -0.23
RNF43-205ENST00000581868 YWHAHQ04917 246 aaPredicted RBP13.61□□□□□ -0.23
RNF43-205ENST00000581868 RAB39AQ14964 217 aa13.61□□□□□ -0.23
RNF43-205ENST00000581868 ZIK1Q3SY52 487 aaPredicted RBP13.61□□□□□ -0.23
RNF43-205ENST00000581868 ANKDD1AQ495B1 522 aa13.61□□□□□ -0.23
RNF43-205ENST00000581868 OTUD3Q5T2D3 398 aaPredicted RBP13.61□□□□□ -0.23
RNF43-205ENST00000581868 ANKS6Q68DC2 871 aa13.61□□□□□ -0.23
RNF43-205ENST00000581868 GDF6Q6KF10 455 aaPredicted RBP13.61□□□□□ -0.23
RNF43-205ENST00000581868 TMEM26Q6ZUK4 368 aa13.61□□□□□ -0.23
RNF43-205ENST00000581868 KCTD8Q6ZWB6 473 aa13.61□□□□□ -0.23
RNF43-205ENST00000581868 ZBTB46Q86UZ6 589 aa13.61□□□□□ -0.23
RNF43-205ENST00000581868 ZNF683Q8IZ20 524 aa13.61□□□□□ -0.23
RNF43-205ENST00000581868 RHEBL1Q8TAI7 183 aa13.61□□□□□ -0.23
RNF43-205ENST00000581868 STAG3L4Q8TBR4 150 aa13.61□□□□□ -0.23
RNF43-205ENST00000581868 TRIM54Q9BYV2 358 aa13.61□□□□□ -0.23
RNF43-205ENST00000581868 CLEC11AQ9Y240 323 aa13.61□□□□□ -0.23
RNF43-205ENST00000581868 FNDC3AQ9Y2H6 1198 aaKnown RBP13.61□□□□□ -0.23
RNF43-205ENST00000581868 ACTL7AQ9Y615 435 aa13.61□□□□□ -0.23
RNF43-205ENST00000581868 A0A1W2PPW3 197 aa13.61□□□□□ -0.23
RNF43-205ENST00000581868 RAMP2O60895 175 aa13.61□□□□□ -0.23
RNF43-205ENST00000581868 GRK4P32298 578 aa13.61□□□□□ -0.23
RNF43-205ENST00000581868 NRG1Q02297 640 aaPredicted RBP13.61□□□□□ -0.23
RNF43-205ENST00000581868 RBBP7Q16576 425 aa13.61□□□□□ -0.23
RNF43-205ENST00000581868 CYBRD1Q53TN4 286 aa13.61□□□□□ -0.23
RNF43-205ENST00000581868 TBPL2Q6SJ96 375 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms