RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 MYCLP1P12525 358 aaPredicted RBP10.33□□□□□ -0.76
CCDC47-203ENST00000580986 GNSP15586 552 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 OGNP20774 298 aaKnown RBP10.33□□□□□ -0.76
CCDC47-203ENST00000580986 NMBRP28336 390 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 CD38P28907 300 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 MAT2AP31153 395 aaKnown RBP10.33□□□□□ -0.76
CCDC47-203ENST00000580986 MC4RP32245 332 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 FOXN2P32314 431 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 PTGER3P43115 390 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 ARSDP51689 593 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 AFF3P51826 1226 aaKnown RBP10.33□□□□□ -0.76
CCDC47-203ENST00000580986 KIAA1024LP59773 190 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 VSNL1P62760 191 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 SRSF5Q13243 272 aaKnown RBP10.33□□□□□ -0.76
CCDC47-203ENST00000580986 STAT4Q14765 748 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 FASTKD3Q14CZ7 662 aaKnown RBP10.33□□□□□ -0.76
CCDC47-203ENST00000580986 LONRF1Q17RB8 773 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 LDLRAP1Q5SW96 308 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 LYPLAL1Q5VWZ2 237 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 DENND2CQ68D51 928 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 LAIR1Q6GTX8 287 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 EMBQ6PCB8 327 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 UNC5AQ6ZN44 842 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 GCNT7Q6ZNI0 430 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 TRMT10CQ7L0Y3 403 aaKnown RBP10.33□□□□□ -0.76
CCDC47-203ENST00000580986 PHYKPLQ8IUZ5 450 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 IGDCC3Q8IVU1 814 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 CNTN4Q8IWV2 1026 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 TMEFF1Q8IYR6 380 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 DDHD1Q8NEL9 900 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 OR4L1Q8NH43 312 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 CEP76Q8TAP6 659 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 BTN2A2Q8WVV5 523 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 SCAMP4Q969E2 229 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 GLYATL1Q969I3 302 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 HDAC10Q969S8 669 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.33□□□□□ -0.76
CCDC47-203ENST00000580986 SKA1Q96BD8 255 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 ZNF669Q96BR6 464 aaPredicted RBP10.33□□□□□ -0.76
CCDC47-203ENST00000580986 SERAC1Q96JX3 654 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 BMFQ96LC9 184 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 TBATAQ96M53 351 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 PWWP2AQ96N64 755 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 TCF12Q99081 682 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 TTC1Q99614 292 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 RIOK2Q9BVS4 552 aaKnown RBP10.33□□□□□ -0.76
CCDC47-203ENST00000580986 TXLNGYQ9BZA5 131 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 WDR26Q9H7D7 661 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 PLAC1Q9HBJ0 212 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 SAYSD1Q9NPB0 183 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 PHPT1Q9NRX4 125 aaPredicted RBP10.33□□□□□ -0.76
CCDC47-203ENST00000580986 MOCS1Q9NZB8 636 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 VPS18Q9P253 973 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 EIF2B4Q9UI10 523 aaKnown RBP10.33□□□□□ -0.76
CCDC47-203ENST00000580986 FKBPLQ9UIM3 349 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 CHMP2BQ9UQN3 213 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 KCTD3Q9Y597 815 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 VPS13AQ96RL7 3174 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 ABCA7Q8IZY2 2146 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 PLXNB3Q9ULL4 1909 aa10.33□□□□□ -0.76
CCDC47-203ENST00000580986 USP34Q70CQ2 3546 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 DOCK9Q9BZ29 2069 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 A0A1W2PR77 199 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 CCDC162PA2VCL2 907 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 FADS2P1A8MWK0 482 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 PROB1E7EW31 1015 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 TNFRSF10CO14798 259 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 VILLO15195 856 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 PFDN6O15212 129 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 BCAT2O15382 392 aaPredicted RBP10.32□□□□□ -0.76
CCDC47-203ENST00000580986 BUD23O43709 281 aaKnown RBP10.32□□□□□ -0.76
CCDC47-203ENST00000580986 EPN2O95208 641 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 VAPBO95292 243 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 SLC4A1P02730 911 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 ABHD2P08910 425 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 MYBL2P10244 700 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 KELP23276 732 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 GPR1P46091 355 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 TTPAP49638 278 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 ADARP55265 1226 aaKnown RBP10.32□□□□□ -0.76
CCDC47-203ENST00000580986 CDK3Q00526 305 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 PTK2BQ14289 1009 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 ITIH4Q14624 930 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 INPP5AQ14642 412 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 LAPTM4AQ15012 233 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 TEAD4Q15561 434 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 CHRNA6Q15825 494 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 TYSND1Q2T9J0 566 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 MAP9Q49MG5 647 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 ATP13A5Q4VNC0 1218 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 RNF187Q5TA31 235 aaPredicted RBP10.32□□□□□ -0.76
CCDC47-203ENST00000580986 RAET1GQ6H3X3 334 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 MRNIPQ6NTE8 343 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 FAM151BQ6UXP7 276 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 PACS1Q6VY07 963 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 MACC1Q6ZN28 852 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 RFLNAQ6ZTI6 216 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 KIAA0408Q6ZU52 694 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 CCDC25Q86WR0 208 aa10.32□□□□□ -0.76
CCDC47-203ENST00000580986 HEATR4Q86WZ0 1026 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms