RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 C1orf131Q8NDD1 294 aaKnown RBP7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 FNIP1Q8TF40 1166 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 ECHDC3Q96DC8 303 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 NUS1Q96E22 293 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 ZNF641Q96N77 438 aaPredicted RBP7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 OR2M4Q96R27 311 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 NCAPGQ9BPX3 1015 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 GTPBP4Q9BZE4 634 aaKnown RBP7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 C5AR2Q9P296 337 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 USP25Q9UHP3 1055 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 HPCAL4Q9UM19 191 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 MYO7BQ6PIF6 2116 aa7.6□□□□□ -1.19
SMARCE1-217ENST00000580654 MAP1AP78559 2803 aaPredicted RBP7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 RASA4BC9J798 803 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 RASA4O43374 803 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 KIF1CO43896 1103 aaKnown RBP7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 RAMP2O60895 175 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 SOD1P00441 154 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 MYL1P05976 194 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 COX6B1P14854 86 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 HTR1EP28566 365 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 FLT3P36888 993 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 GLRBP48167 497 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 NRG1Q02297 640 aaPredicted RBP7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 ZNF630Q2M218 657 aaPredicted RBP7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 SMTNL2Q2TAL5 461 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 SLC25A52Q3SY17 297 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 VWA5B1Q5TIE3 1220 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 SMYD5Q6GMV2 418 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 LCN10Q6JVE6 187 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 IYDQ6PHW0 289 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 DOK6Q6PKX4 331 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 IGFL3Q6UXB1 125 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 Q6ZS92 163 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 PHLDB2Q86SQ0 1253 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 PPP1R3BQ86XI6 285 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 PLXDC1Q8IUK5 500 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 NXPE1Q8N323 547 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 ZBTB2Q8N680 514 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 CASKIN2Q8WXE0 1202 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 TGM7Q96PF1 710 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 ILKAPQ9H0C8 392 aaPredicted RBP7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 ZBTB20Q9HC78 741 aaPredicted RBP7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 B4GALT6Q9UBX8 382 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 TBC1D29Q9UFV1 150 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 OR12D3Q9UGF7 316 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 ARMCX3Q9UH62 379 aaPredicted RBP7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 STAP1Q9ULZ2 295 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 PCDHGC3Q9UN70 934 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 FARSAQ9Y285 508 aaKnown RBP7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 TMEM98Q9Y2Y6 226 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 CSAG2Q9Y5P2 127 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 SLC30A1Q9Y6M5 507 aa7.59□□□□□ -1.19
SMARCE1-217ENST00000580654 STAB1Q9NY15 2570 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 A0A1B0GUH1 482 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 A0A1B0GVL5 298 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 TRIM49BA6NDI0 452 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 C19orf84I3L1E1 186 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 TOX3O15405 576 aaPredicted RBP7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 LRIG2O94898 1065 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 EDN3P14138 238 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 PFKFB1P16118 471 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 TNFAIP3P21580 790 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 TEAD1P28347 426 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 ETV3P41162 512 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 RPS15P62841 145 aaKnown RBP7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 GPS2Q13227 327 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 ZNF235Q14590 738 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 GRM3Q14832 879 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 LLGL1Q15334 1064 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 CNGA3Q16281 694 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 IZUMO3Q5VZ72 239 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 RWDD4Q6NW29 188 aaKnown RBP7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 DUS1LQ6P1R4 473 aaKnown RBP7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 BNC2Q6ZN30 1099 aaPredicted RBP7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 RFLNAQ6ZTI6 216 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 MARK2Q7KZI7 788 aaKnown RBP7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 PRSS42Q7Z5A4 293 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 HSD11B1LQ7Z5J1 315 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 TRIM74Q86UV6 250 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 SLC38A9Q8NBW4 561 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 KLHL6Q8WZ60 621 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 RELTQ969Z4 430 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 SH3KBP1Q96B97 665 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 DTD2Q96FN9 168 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 CFAP57Q96MR6 1250 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 ZNF396Q96N95 335 aaPredicted RBP7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 TUBGCP5Q96RT8 1024 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 SCAND2PQ9GZW5 306 aaPredicted RBP7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 EPB41L1Q9H4G0 881 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 UPF2Q9HAU5 1272 aaKnown RBP7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 PDFQ9HBH1 243 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 HPSEQ9Y251 543 aa7.58□□□□□ -1.2
SMARCE1-217ENST00000580654 CCDC88CQ9P219 2028 aa7.57□□□□□ -1.2
SMARCE1-217ENST00000580654 LILRA5A6NI73 299 aa7.57□□□□□ -1.2
SMARCE1-217ENST00000580654 TRAFD1O14545 582 aaPredicted RBP7.57□□□□□ -1.2
SMARCE1-217ENST00000580654 CAPN1P07384 714 aa7.57□□□□□ -1.2
SMARCE1-217ENST00000580654 CD99P14209 185 aa7.57□□□□□ -1.2
SMARCE1-217ENST00000580654 DRD2P14416 443 aa7.57□□□□□ -1.2
SMARCE1-217ENST00000580654 FOLR1P15328 257 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms