RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 JCHAINP01591 159 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 AK4P27144 223 aaPredicted RBP14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 TSPAN7P41732 249 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 ACTR1BP42025 376 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 MAZP56270 477 aaKnown RBP14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 ACTR1AP61163 376 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 CFHR1Q03591 330 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 TFDP2Q14188 446 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 MESDQ14696 234 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 KIR2DS5Q14953 304 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 MAP9Q49MG5 647 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 ARHGAP40Q5TG30 622 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 TMEM71Q6P5X7 295 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 SLC30A9Q6PML9 568 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 ZNF574Q6ZN55 896 aaPredicted RBP14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 TMPRSS9Q7Z410 1059 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 TMC3Q7Z5M5 1100 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 NT5DC3Q86UY8 548 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 RHOT1Q8IXI2 618 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 ZNF843Q8N446 348 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 Q8N9G6 341 aaPredicted RBP14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 AGBL5Q8NDL9 886 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 CCDC112Q8NEF3 446 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 DDA1Q9BW61 102 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 MAK16Q9BXY0 300 aaKnown RBP14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 SYNDIG1Q9H7V2 258 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 ZFYVE1Q9HBF4 777 aa14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 ASH1LQ9NR48 2969 aaKnown RBP14.38□□□□□ -0.11
SMARCE1-216ENST00000580419 IGHV5-10-1A0A0J9YXX1 117 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 PMS2P1A4D2B8 440 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 CHUKO15111 745 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 PPM1DO15297 605 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 PSTPIP1O43586 416 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 NUAK1O60285 661 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 LCA5LO95447 670 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 THRAP10827 490 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 CD86P42081 329 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 POLD2P49005 469 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 RAB15P59190 212 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 ZBTB17Q13105 803 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 TBX2Q13207 712 aaPredicted RBP14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 TEX44Q53QW1 395 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 ZDHHC20Q5W0Z9 365 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 IYDQ6PHW0 289 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 LYSMD3Q7Z3D4 306 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 CPNE8Q86YQ8 564 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 SFTPA2Q8IWL1 248 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 LPCAT1Q8NF37 534 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 MED8Q96G25 268 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 TEFMQ96QE5 360 aaKnown RBP14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 TAAR9Q96RI9 348 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 VAT1Q99536 393 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 CHP1Q99653 195 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 ASPSCR1Q9BZE9 553 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 SEMA6CQ9H3T2 930 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 TRABDQ9H4I3 376 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 STN1Q9H668 368 aaKnown RBP14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 TRIM39Q9HCM9 518 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 PISDQ9UG56 409 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 PCDHB11Q9Y5F2 797 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 ADGRG1Q9Y653 693 aa14.37□□□□□ -0.11
SMARCE1-216ENST00000580419 A0A0A6YYK5 440 aaPredicted RBP14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 GOLGA6CA6NDK9 693 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 GOLGA6BA6NDN3 693 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 C9orf172C9J069 976 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 KCNK1O00180 336 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 EFSO43281 561 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 VEGFDO43915 354 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 KCNJ13O60928 360 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 GOLGA6DP0CG33 693 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 SFTPCP11686 197 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 F3P13726 295 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 ALDH4A1P30038 563 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 OR1D5P58170 312 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 CDK18Q07002 472 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 BIRC2Q13490 618 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 C16orf72Q14CZ0 275 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 PRKD1Q15139 912 aaPredicted RBP14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 PTPRRQ15256 657 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 TAF1BQ53T94 588 aaPredicted RBP14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 SARM1Q6SZW1 724 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 WASH2PQ6VEQ5 465 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 RFLNAQ6ZTI6 216 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 TRAM1L1Q8N609 369 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 OR10G6Q8NH81 332 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 PTCD2Q8WV60 388 aaKnown RBP14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 TEKT5Q96M29 485 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 PLEKHG4BQ96PX9 1271 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 VPS35Q96QK1 796 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 AGAP2Q99490 1192 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 C19orf43Q9BQ61 176 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 ZPBPQ9BS86 351 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 WASH6PQ9NQA3 447 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 GOLGA6AQ9NYA3 693 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 CD84Q9UIB8 345 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 TTLL3Q9Y4R7 772 aa14.36□□□□□ -0.11
SMARCE1-216ENST00000580419 HEY1Q9Y5J3 304 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms