RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 NUDCD1Q96RS6 583 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 SLC29A3Q9BZD2 475 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 VPS16Q9H269 839 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 KLHL3Q9UH77 587 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 ZNHIT2Q9UHR6 403 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 DNPEPQ9ULA0 475 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 PADI1Q9ULC6 663 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 TMEM98Q9Y2Y6 226 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 PPIL1Q9Y3C6 166 aa12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 PCDHGA9Q9Y5G4 932 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-216ENST00000579853 ADGRG4Q8IZF6 3080 aa12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 GOLGA6L3A6NEY3 463 aa12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 NPIPB15A6NHN6 443 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 ASMTLO95671 621 aa12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 SOD1P00441 154 aa12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 C9P02748 559 aa12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 F3P13726 295 aa12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 ERCC2P18074 760 aa12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 MAPK9P45984 424 aa12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 PGDP52209 483 aa12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 RPL7AP62424 266 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 SLC10A7Q0GE19 358 aa12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 ERMARDQ5T6L9 678 aa12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 ARMC12Q5T9G4 340 aa12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 RFX8Q6ZV50 586 aa12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 MARK2Q7KZI7 788 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 MAMDC2Q7Z304 686 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 GALNT6Q8NCL4 622 aa12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 NSMCE1Q8WV22 266 aa12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 THAP4Q8WY91 577 aa12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 COX14Q96I36 57 aa12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 C9orf72Q96LT7 481 aa12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 ABCG8Q9H221 673 aa12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 DHX35Q9H5Z1 703 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 RMI1Q9H9A7 625 aa12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 UCK1Q9HA47 277 aa12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 MAP4K5Q9Y4K4 846 aa12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 PCDHGB7Q9Y5F8 929 aa12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 ZFHX3Q15911 3703 aa12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 DIDO1Q9BTC0 2240 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-216ENST00000579853 TCRBV5S1A1TA0A578 114 aa12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 SEMA7AO75326 666 aa12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 LRCH4O75427 683 aa12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 KIAA0754O94854 1291 aa12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 NDUFA10O95299 355 aa12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 PGLSO95336 258 aa12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 FURINP09958 794 aa12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 EEF1GP26641 437 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 HCAR3P49019 387 aa12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 POLR2FP61218 127 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 DNASE1L3Q13609 305 aa12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 MON1BQ7L1V2 547 aa12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 CHST15Q7LFX5 561 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 HPS6Q86YV9 775 aa12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 PSTKQ8IV42 348 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 NSMCE3Q96MG7 304 aa12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 OR6C1Q96RD1 312 aa12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 MGME1Q9BQP7 344 aa12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 SLC25A23Q9BV35 468 aa12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 GPR87Q9BY21 358 aa12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 GANQ9H2C0 597 aa12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 OCEL1Q9H607 264 aa12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 NOD2Q9HC29 1040 aa12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 CPNE7Q9UBL6 633 aa12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 TBC1D29Q9UFV1 150 aa12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 CD84Q9UIB8 345 aa12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 LNPEPQ9UIQ6 1025 aa12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 CCDC168Q8NDH2 2452 aa12.08□□□□□ -0.48
CDK5RAP3-216ENST00000579853 F8P00451 2351 aa12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 NF1P21359 2839 aa12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 A1L4Q6 167 aa12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 A6NCN8 305 aa12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 SORBS2O94875 1100 aaKnown RBP12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 EML2O95834 649 aa12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 FGF5P12034 268 aa12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 ZNF28P17035 718 aa12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 JAM2P57087 298 aa12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 TRAF2Q12933 501 aa12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 PAPD7Q5XG87 772 aaKnown RBP12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 LRRC66Q68CR7 880 aa12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 PPP1R2P3Q6NXS1 205 aa12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 ARHGAP36Q6ZRI8 547 aa12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 TSPAN33Q86UF1 283 aa12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 TRIM74Q86UV6 250 aa12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 PPP1R3BQ86XI6 285 aa12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 TICAM1Q8IUC6 712 aa12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 PHYKPLQ8IUZ5 450 aa12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 SCAMP4Q969E2 229 aa12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 RNF25Q96BH1 459 aaPredicted RBP12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 FCRL4Q96PJ5 515 aa12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 PCDHB18PQ96TA0 734 aa12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 ZNF768Q9H5H4 540 aaKnown RBP12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 ZWILCHQ9H900 591 aa12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 MLXIPLQ9NP71 852 aa12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 LHX9Q9NQ69 397 aa12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 GPATCH2LQ9NWQ4 482 aa12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 G3BP2Q9UN86 482 aaKnown RBP12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 ZNF451Q9Y4E5 1061 aa12.07□□□□□ -0.48
CDK5RAP3-216ENST00000579853 SEC16AO15027 2179 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms