RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 ASB8Q9H765 288 aa15.45■□□□□ 0.06
SLC6A4-205ENST00000579221 UGT1A7Q9HAW7 530 aa15.45■□□□□ 0.06
SLC6A4-205ENST00000579221 UGT1A10Q9HAW8 530 aa15.45■□□□□ 0.06
SLC6A4-205ENST00000579221 UGT1A8Q9HAW9 530 aa15.45■□□□□ 0.06
SLC6A4-205ENST00000579221 TRIM39Q9HCM9 518 aa15.45■□□□□ 0.06
SLC6A4-205ENST00000579221 SLC2A6Q9UGQ3 507 aa15.45■□□□□ 0.06
SLC6A4-205ENST00000579221 MAD1L1Q9Y6D9 718 aa15.45■□□□□ 0.06
SLC6A4-205ENST00000579221 SPAG17Q6Q759 2223 aa15.45■□□□□ 0.06
SLC6A4-205ENST00000579221 PLXNA2O75051 1894 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 WDFY4Q6ZS81 3184 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 FAM237BA0A1B0GVD1 139 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 CCL22O00626 93 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 GAPDHSO14556 408 aaPredicted RBP15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 YKT6O15498 198 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 TNFP01375 233 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 ITGALP20701 1170 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 MC4RP32245 332 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 RXRGP48443 463 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 BLKP51451 505 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 SRP54P61011 504 aaKnown RBP15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 PRAMEP78395 509 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 PPARDQ03181 441 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 ACVR1Q04771 509 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 DHX9Q08211 1270 aaKnown RBP15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 EIF2B5Q13144 721 aaKnown RBP15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 BBS9Q3SYG4 887 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 GPR33Q49SQ1 333 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 ZRANB3Q5FWF4 1079 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 PRAMEF14Q5SWL7 426 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 TPRG1LQ5T0D9 272 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 SNX20Q7Z614 316 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 PHYKPLQ8IUZ5 450 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 MINDY1Q8N5J2 469 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 OR13J1Q8NGT2 312 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 OR6P1Q8NGX9 317 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 GDAP1Q8TB36 358 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 ART4Q93070 314 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 ULK4Q96C45 1275 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 STAMBPL1Q96FJ0 436 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 ZNF778Q96MU6 729 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 EDEM2Q9BV94 578 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 EPB41L5Q9HCM4 733 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 FAM114A2Q9NRY5 505 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 DNAJC28Q9NX36 388 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 GRHL1Q9NZI5 618 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 KLQ9UEF7 1012 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 MOSPD1Q9UJG1 213 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 MUC6Q6W4X9 2439 aa15.44■□□□□ 0.06
SLC6A4-205ENST00000579221 A0A1B0GTQ1 180 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 TMEM202A6NGA9 273 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 H3BM21 787 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 RASGRP1O95267 797 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 CSF2P04141 144 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 CEACAM5P06731 702 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 PAMP19021 973 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 NMBRP28336 390 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 PLA2G5P39877 138 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 ARSDP51689 593 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 PLTPP55058 493 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 HNRNPKP61978 463 aaKnown RBP eCLIP15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 CACNG1Q06432 222 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 NFATC2Q13469 925 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 HIF1AQ16665 826 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 ZNF542PQ5EBM4 170 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 LDLRAP1Q5SW96 308 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 AFTPHQ6ULP2 937 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 TAS2R42Q7RTR8 314 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 CCNJLQ8IV13 435 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 SEC14L1Q92503 715 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 TSACCQ96A04 125 aaPredicted RBP15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 LRRC39Q96DD0 335 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 SGSM3Q96HU1 749 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 TTC1Q99614 292 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 EBNA1BP2Q99848 306 aaKnown RBP15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 NAT9Q9BTE0 207 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 SLC13A1Q9BZW2 595 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 FAM96AQ9H5X1 160 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 SUDS3Q9H7L9 328 aaPredicted RBP15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 TMEM9BQ9NQ34 198 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 TREX1Q9NSU2 369 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 DNAAF2Q9NVR5 837 aaKnown RBP15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 SMOXQ9NWM0 555 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 CRLS1Q9UJA2 301 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 SLC17A4Q9Y2C5 497 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 TMEM98Q9Y2Y6 226 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 LRRK1Q38SD2 2015 aa15.43■□□□□ 0.06
SLC6A4-205ENST00000579221 SDK1Q7Z5N4 2213 aa15.42■□□□□ 0.06
SLC6A4-205ENST00000579221 CCDC162PA2VCL2 907 aa15.42■□□□□ 0.06
SLC6A4-205ENST00000579221 AGAP14A8MT82 685 aa15.42■□□□□ 0.06
SLC6A4-205ENST00000579221 CDX4O14627 284 aaPredicted RBP15.42■□□□□ 0.06
SLC6A4-205ENST00000579221 TP73O15350 636 aa15.42■□□□□ 0.06
SLC6A4-205ENST00000579221 VEGFDO43915 354 aa15.42■□□□□ 0.06
SLC6A4-205ENST00000579221 GOT2P00505 430 aaKnown RBP15.42■□□□□ 0.06
SLC6A4-205ENST00000579221 POLBP06746 335 aa15.42■□□□□ 0.06
SLC6A4-205ENST00000579221 JUNDP17535 347 aa15.42■□□□□ 0.06
SLC6A4-205ENST00000579221 TUBB4BP68371 445 aa15.42■□□□□ 0.06
SLC6A4-205ENST00000579221 CBLBQ13191 982 aa15.42■□□□□ 0.06
SLC6A4-205ENST00000579221 SUZ12Q15022 739 aaKnown RBP15.42■□□□□ 0.06
SLC6A4-205ENST00000579221 ALG11Q2TAA5 492 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms