RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-210	ENST00000578733	ZRANB3	Q5FWF4	1079 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	MRNIP	Q6NTE8	343 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	PNCK	Q6P2M8	343 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	ADAMTSL4	Q6UY14	1074 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	PTAR1	Q7Z6K3	402 aa	Predicted RBP	11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	TMEM135	Q86UB9	458 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	PHYKPL	Q8IUZ5	450 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	ANKMY2	Q8IV38	441 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	GPR26	Q8NDV2	337 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	OR4L1	Q8NH43	312 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	CEP76	Q8TAP6	659 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	GSDMB	Q8TAX9	411 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	GDAP1	Q8TB36	358 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	ZNF398	Q8TD17	642 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	SCG3	Q8WXD2	468 aa	Known RBP	11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	CDKL2	Q92772	493 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	HDAC10	Q969S8	669 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	CENPT	Q96BT3	561 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	KLHDC7B	Q96G42	594 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	TBATA	Q96M53	351 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	VPS35	Q96QK1	796 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	MYOC	Q99972	504 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	TREX1	Q9NSU2	369 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	CATSPERZ	Q9NTU4	200 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	GMEB2	Q9UKD1	530 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	VPS9D1	Q9Y2B5	631 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	KCTD3	Q9Y597	815 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	PCDHGA5	Q9Y5G8	931 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733	FAM169A	Q9Y6X4	670 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733		R4GN57	208 aa		11.21	□□□□□ -0.61
CDK5RAP3-210	ENST00000578733		A0A0U1RQS6	177 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	CFAP99	D6REC4	459 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	BCAT2	O15382	392 aa	Predicted RBP	11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	ERLIN1	O75477	346 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	KRT37	O76014	449 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	VAPB	O95292	243 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	GOT2	P00505	430 aa	Known RBP	11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	HOXC4	P09017	264 aa	Predicted RBP	11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	GM2A	P17900	193 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	STX2	P32856	288 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	IGFALS	P35858	605 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	PTGER3	P43115	390 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	TTPA	P49638	278 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	ILF2	Q12905	390 aa	Known RBP	11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	NFATC2	Q13469	925 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	GTF2H3	Q13889	308 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	FGL2	Q14314	439 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	INPP5A	Q14642	412 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	LDLRAP1	Q5SW96	308 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	LAIR1	Q6GTX8	287 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	CERS6	Q6ZMG9	384 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	CCNI2	Q6ZMN8	369 aa	Predicted RBP	11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	TAS2R42	Q7RTR8	314 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	RELL1	Q8IUW5	271 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	SYT12	Q8IV01	421 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	MFSD2A	Q8NA29	543 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	TMEM145	Q8NBT3	493 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	OR13J1	Q8NGT2	312 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	PIGK	Q92643	395 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	SCAMP4	Q969E2	229 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	EID2B	Q96D98	161 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	MFSD3	Q96ES6	412 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	DCUN1D1	Q96GG9	259 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	SGSM3	Q96HU1	749 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	HIC2	Q96JB3	615 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	PWWP2A	Q96N64	755 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	SLC6A18	Q96N87	628 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	CNTNAP3B	Q96NU0	1288 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	KLF6	Q99612	283 aa	Predicted RBP	11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	FAM167B	Q9BTA0	163 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	CNTNAP3	Q9BZ76	1288 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	FZD3	Q9NPG1	666 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	IL26	Q9NPH9	171 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	PPAN	Q9NQ55	473 aa	Known RBP	11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	C20orf96	Q9NUD7	363 aa	Predicted RBP	11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	SMOX	Q9NWM0	555 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	NSMCE4A	Q9NXX6	385 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	RAB21	Q9UL25	225 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	SMG5	Q9UPR3	1016 aa	Known RBP	11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	EPG5	Q9HCE0	2579 aa		11.2	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	CCDC162P	A2VCL2	907 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	QSOX1	O00391	747 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	CD3EAP	O15446	510 aa	Known RBP	11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	BANF1	O75531	89 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	EPN2	O95208	641 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	SLC25A14	O95258	325 aa	Predicted RBP	11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	THEGL	P0DJG4	465 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	MYCLP1	P12525	358 aa	Predicted RBP	11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	MSH3	P20585	1137 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	ITPKA	P23677	461 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	PML	P29590	882 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	ECHS1	P30084	290 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	TRIM23	P36406	574 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	KIAA1024L	P59773	190 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	XIAP	P98170	497 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	PEX6	Q13608	980 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	FRG1	Q14331	258 aa	Known RBP	11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	PTPRCAP	Q14761	206 aa		11.19	□□□□□ -0.62
CDK5RAP3-210	ENST00000578733	CHRNA6	Q15825	494 aa		11.19	□□□□□ -0.62

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