RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 NFATC4Q14934 902 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 FASTKD3Q14CZ7 662 aaKnown RBP12.61□□□□□ -0.39
MKS1-206ENST00000577824 CHRNA6Q15825 494 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 LPAL2Q16609 132 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 BBS9Q3SYG4 887 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 GPR33Q49SQ1 333 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 ANKRD20A4Q4UJ75 823 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 ATP13A5Q4VNC0 1218 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 ALS2CLQ60I27 953 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 WDR93Q6P2C0 686 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 CASC4Q6P4E1 433 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 FAM151BQ6UXP7 276 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 KDM7AQ6ZMT4 941 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 CEP128Q6ZU80 1094 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 SNX20Q7Z614 316 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 PHYKPLQ8IUZ5 450 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 IGDCC3Q8IVU1 814 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 FBXO36Q8NEA4 188 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 BTN2A2Q8WVV5 523 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 SCG3Q8WXD2 468 aaKnown RBP12.61□□□□□ -0.39
MKS1-206ENST00000577824 PIGKQ92643 395 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 TBATAQ96M53 351 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 TRIM56Q9BRZ2 755 aaKnown RBP12.61□□□□□ -0.39
MKS1-206ENST00000577824 APOOQ9BUR5 198 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 MIR1-1HGQ9H1L0 117 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 AASDHPPTQ9NRN7 309 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 VPS18Q9P253 973 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 MTRF1LQ9UGC7 380 aaKnown RBP12.61□□□□□ -0.39
MKS1-206ENST00000577824 RPS6KL1Q9Y6S9 549 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 FAM169AQ9Y6X4 670 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 DOCK9Q9BZ29 2069 aa12.61□□□□□ -0.39
MKS1-206ENST00000577824 CACNA1EQ15878 2313 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 OTOGLQ3ZCN5 2332 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 SPTY2D1-AS1A0A0U1RR47 76 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 CCDC162PA2VCL2 907 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 GPR89AB7ZAQ6 455 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 TLR4O00206 839 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 GPR39O43194 453 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 GOT2P00505 430 aaKnown RBP12.6□□□□□ -0.39
MKS1-206ENST00000577824 GPR89BP0CG08 455 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 ITGALP20701 1170 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 CTSKP43235 329 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 BNC1Q01954 994 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 CACNG1Q06432 222 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 PTK2BQ14289 1009 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 TEAD4Q15561 434 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 SPANXN3Q5MJ09 141 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 TPRG1LQ5T0D9 272 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 ZNF449Q6P9G9 518 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 UNC5AQ6ZN44 842 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 Q6ZSR6 202 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 PTAR1Q7Z6K3 402 aaPredicted RBP12.6□□□□□ -0.39
MKS1-206ENST00000577824 LMNTD2Q8IXW0 634 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 ZBED8Q8IZ13 594 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.6□□□□□ -0.39
MKS1-206ENST00000577824 GPR150Q8NGU9 434 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 HDAC10Q969S8 669 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 SKA1Q96BD8 255 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 ZNF669Q96BR6 464 aaPredicted RBP12.6□□□□□ -0.39
MKS1-206ENST00000577824 ULK4Q96C45 1275 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 KLHDC7BQ96G42 594 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 SCARF2Q96GP6 870 aaPredicted RBP12.6□□□□□ -0.39
MKS1-206ENST00000577824 HIC2Q96JB3 615 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 FCRL3Q96P31 734 aaPredicted RBP12.6□□□□□ -0.39
MKS1-206ENST00000577824 HINFPQ9BQA5 517 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 LGR4Q9BXB1 951 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 ZDHHC5Q9C0B5 715 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 ERVMER34-1Q9H9K5 563 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 PHPT1Q9NRX4 125 aaPredicted RBP12.6□□□□□ -0.39
MKS1-206ENST00000577824 GMEB2Q9UKD1 530 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 CHMP2BQ9UQN3 213 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 SLC17A4Q9Y2C5 497 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 OR1A2Q9Y585 309 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 MAD1L1Q9Y6D9 718 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 SLC30A1Q9Y6M5 507 aa12.6□□□□□ -0.39
MKS1-206ENST00000577824 TP53BP1Q12888 1972 aaPredicted RBP12.6□□□□□ -0.39
MKS1-206ENST00000577824 ZNF292O60281 2723 aa12.59□□□□□ -0.39
MKS1-206ENST00000577824 CCDC78A2IDD5 438 aa12.59□□□□□ -0.39
MKS1-206ENST00000577824 GOLGA8CPA6NN73 597 aa12.59□□□□□ -0.39
MKS1-206ENST00000577824 CACNB4O00305 520 aaPredicted RBP12.59□□□□□ -0.39
MKS1-206ENST00000577824 CCL22O00626 93 aa12.59□□□□□ -0.39
MKS1-206ENST00000577824 TNFRSF10CO14798 259 aa12.59□□□□□ -0.39
MKS1-206ENST00000577824 GSTA2P09210 222 aa12.59□□□□□ -0.39
MKS1-206ENST00000577824 KELP23276 732 aa12.59□□□□□ -0.39
MKS1-206ENST00000577824 ACRV1P26436 265 aa12.59□□□□□ -0.39
MKS1-206ENST00000577824 CA5AP35218 305 aa12.59□□□□□ -0.39
MKS1-206ENST00000577824 CSNK1EP49674 416 aaKnown RBP12.59□□□□□ -0.39
MKS1-206ENST00000577824 PRAMEP78395 509 aa12.59□□□□□ -0.39
MKS1-206ENST00000577824 TMPRSS15P98073 1019 aa12.59□□□□□ -0.39
MKS1-206ENST00000577824 PDE1CQ14123 709 aaPredicted RBP12.59□□□□□ -0.39
MKS1-206ENST00000577824 FZD2Q14332 565 aa12.59□□□□□ -0.39
MKS1-206ENST00000577824 LONRF1Q17RB8 773 aa12.59□□□□□ -0.39
MKS1-206ENST00000577824 TYSND1Q2T9J0 566 aa12.59□□□□□ -0.39
MKS1-206ENST00000577824 LDLRAP1Q5SW96 308 aa12.59□□□□□ -0.39
MKS1-206ENST00000577824 PSAPL1Q6NUJ1 521 aa12.59□□□□□ -0.39
MKS1-206ENST00000577824 LAYNQ6UX15 382 aa12.59□□□□□ -0.39
MKS1-206ENST00000577824 PACS1Q6VY07 963 aa12.59□□□□□ -0.39
MKS1-206ENST00000577824 CYS1Q717R9 158 aa12.59□□□□□ -0.39
MKS1-206ENST00000577824 PARGQ86W56 976 aa12.59□□□□□ -0.39
MKS1-206ENST00000577824 SPATS2Q86XZ4 545 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms