RNA–Protein interactions for RNA: ENST00000577802.1

CDK5RAP3-205, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 415 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-205ENST00000577802 UBA6A0AVT1 1052 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 OR51F1A6NGY5 319 aa13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 PLK4O00444 970 aa13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 RECQL5O94762 991 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 ESR1P03372 595 aa13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 MT-ND3P03897 115 aa13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 TEAD1P28347 426 aa13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 POU4F1Q01851 419 aa13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 CTBP1Q13363 440 aa13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 PTPRCAPQ14761 206 aa13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 PTPRRQ15256 657 aa13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 SMAD1Q15797 465 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 TAF1BQ53T94 588 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 MAMSTRQ6ZN01 415 aa13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 Q6ZVL8 140 aa13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 LCA5Q86VQ0 697 aa13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 ZC3HC1Q86WB0 502 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 HORMAD1Q86X24 394 aa13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 DENND6AQ8IWF6 608 aa13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 ARFGAP2Q8N6H7 521 aa13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 DENND6BQ8NEG7 585 aa13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 DCUN1D1Q96GG9 259 aa13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 TSNARE1Q96NA8 513 aa13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 COPS8Q99627 209 aa13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 PCED1AQ9H1Q7 454 aa13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 ITM2CQ9NQX7 267 aa13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 CTNNAL1Q9UBT7 734 aa13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 SERGEFQ9UGK8 458 aa13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 MTF2Q9Y483 593 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 PSAT1Q9Y617 370 aa13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 F5P12259 2224 aa13.2□□□□□ -0.3
CDK5RAP3-205ENST00000577802 TBC1D3DA0A087WVF3 549 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 TBC1D3IA0A087WXS9 549 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 TBC1D3EA0A087X179 549 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 TBC1D3KA0A087X1G2 549 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 FAM95CA0A1B0GW59 222 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 TBC1D3FA6NER0 549 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 AGAP14A8MT82 685 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 TBC1D3LB9A6J9 549 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 TRIM49D1C9J1S8 452 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 GAPDHSO14556 408 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 MMP20O60882 483 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 RNGTTO60942 597 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 SEMA4FO95754 770 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 TBC1D3HP0C7X1 549 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 RPS3P23396 243 aaKnown RBP eCLIP13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 AKT1P31749 480 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 NSG1P42857 185 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 GPR1P46091 355 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 CXCL12P48061 93 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 KPNA2P52292 529 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 TAS2R38P59533 333 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 MPP1Q00013 466 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 SEMG2Q02383 582 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 FZD5Q13467 585 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 CHRNA6Q15825 494 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 TBC1D3GQ6DHY5 549 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 RAET1GQ6H3X3 334 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 TBC1D3CQ6IPX1 549 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 PSAPL1Q6NUJ1 521 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 UGT3A1Q6NUS8 523 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 TIFABQ6ZNK6 161 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 SERPINA9Q86WD7 417 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 TBC1D3Q8IZP1 549 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 GPATCH11Q8N954 259 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 DDHD1Q8NEL9 900 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 GDAP1Q8TB36 358 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 LPGAT1Q92604 370 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 ELMO2Q96JJ3 720 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 HHIPQ96QV1 700 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 RIOK2Q9BVS4 552 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 IQCGQ9H095 443 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 ABCG8Q9H221 673 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 POPDC3Q9HBV1 291 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 SSU72Q9NP77 194 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 FBXO6Q9NRD1 293 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 ZDHHC3Q9NYG2 299 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 MARCH4Q9P2E8 410 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 SLC17A6Q9P2U8 582 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 EBF1Q9UH73 591 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 CD84Q9UIB8 345 aa13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 SMG5Q9UPR3 1016 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-205ENST00000577802 A0A1W2PQU0 124 aa13.18□□□□□ -0.3
CDK5RAP3-205ENST00000577802 E5RI56 91 aa13.18□□□□□ -0.3
CDK5RAP3-205ENST00000577802 PRMT5O14744 637 aaPredicted RBP13.18□□□□□ -0.3
CDK5RAP3-205ENST00000577802 AP2A2O94973 939 aa13.18□□□□□ -0.3
CDK5RAP3-205ENST00000577802 SYF2O95926 243 aaKnown RBP13.18□□□□□ -0.3
CDK5RAP3-205ENST00000577802 S1PR4O95977 384 aa13.18□□□□□ -0.3
CDK5RAP3-205ENST00000577802 AHSGP02765 367 aa13.18□□□□□ -0.3
CDK5RAP3-205ENST00000577802 MPOP05164 745 aa13.18□□□□□ -0.3
CDK5RAP3-205ENST00000577802 STMN1P16949 149 aa13.18□□□□□ -0.3
CDK5RAP3-205ENST00000577802 AOC1P19801 751 aa13.18□□□□□ -0.3
CDK5RAP3-205ENST00000577802 MSH3P20585 1137 aa13.18□□□□□ -0.3
CDK5RAP3-205ENST00000577802 CRABP2P29373 138 aa13.18□□□□□ -0.3
CDK5RAP3-205ENST00000577802 CD6P30203 668 aa13.18□□□□□ -0.3
CDK5RAP3-205ENST00000577802 BMPR2Q13873 1038 aa13.18□□□□□ -0.3
CDK5RAP3-205ENST00000577802 GTF2H3Q13889 308 aa13.18□□□□□ -0.3
CDK5RAP3-205ENST00000577802 LRRC14Q15048 493 aa13.18□□□□□ -0.3
CDK5RAP3-205ENST00000577802 DBN1Q16643 649 aa13.18□□□□□ -0.3
CDK5RAP3-205ENST00000577802 TMEM259Q4ZIN3 620 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms