RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 OR6C1Q96RD1 312 aa10.02□□□□□ -0.81
NPLOC4-220ENST00000576940 NUDCD1Q96RS6 583 aa10.02□□□□□ -0.81
NPLOC4-220ENST00000576940 RUFY1Q96T51 708 aa10.02□□□□□ -0.81
NPLOC4-220ENST00000576940 AKIRIN1Q9H9L7 192 aaPredicted RBP10.02□□□□□ -0.81
NPLOC4-220ENST00000576940 SEPT11Q9NVA2 429 aaKnown RBP10.02□□□□□ -0.81
NPLOC4-220ENST00000576940 AP4E1Q9UPM8 1137 aa10.02□□□□□ -0.81
NPLOC4-220ENST00000576940 CRYBG3Q68DQ2 2970 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 ANKRD62A6NC57 917 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 SOCS5O75159 536 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 NDUFA10O95299 355 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 PGLSO95336 258 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 CLDN1O95832 211 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 CCNYL3P0C7X3 344 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 HTR7P34969 479 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 DCTP40126 519 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 CCL11P51671 97 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 EPHA4P54764 986 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 CHAF1BQ13112 559 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 LRP8Q14114 963 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 ZNF235Q14590 738 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 PRR30Q53SZ7 412 aaPredicted RBP10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 PPP6R3Q5H9R7 873 aaPredicted RBP10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 ERMARDQ5T6L9 678 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 TMCO4Q5TGY1 634 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 LRRC66Q68CR7 880 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 MON1BQ7L1V2 547 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 PLXDC1Q8IUK5 500 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 APLFQ8IW19 511 aaPredicted RBP10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 EXD1Q8NHP7 514 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 PRR7Q8TB68 274 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 STAMBPL1Q96FJ0 436 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 COX14Q96I36 57 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 C9orf72Q96LT7 481 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 TGM7Q96PF1 710 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 MCCC1Q96RQ3 725 aaPredicted RBP10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 PEBP4Q96S96 227 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 RIOK2Q9BVS4 552 aaKnown RBP10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 STN1Q9H668 368 aaKnown RBP10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 FAM207AQ9NSI2 230 aaPredicted RBP10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 CUEDC1Q9NWM3 386 aaPredicted RBP10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 TAB2Q9NYJ8 693 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 OGFRQ9NZT2 677 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 LUZP4Q9P127 313 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 RCOR3Q9P2K3 495 aaPredicted RBP10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 CPNE7Q9UBL6 633 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 CNOT8Q9UFF9 292 aaKnown RBP10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 KCND3Q9UK17 655 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 PADI1Q9ULC6 663 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 CNOT6Q9ULM6 557 aaKnown RBP10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 PPIL1Q9Y3C6 166 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 SLC30A1Q9Y6M5 507 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 SHANK1Q9Y566 2161 aa10.01□□□□□ -0.81
NPLOC4-220ENST00000576940 A6NCN8 305 aa10□□□□□ -0.81
NPLOC4-220ENST00000576940 KIF1CO43896 1103 aaKnown RBP10□□□□□ -0.81
NPLOC4-220ENST00000576940 SPAG6O75602 509 aa10□□□□□ -0.81
NPLOC4-220ENST00000576940 C9P02748 559 aa10□□□□□ -0.81
NPLOC4-220ENST00000576940 ANKRD34CP0C6C1 535 aa10□□□□□ -0.81
NPLOC4-220ENST00000576940 ACP5P13686 325 aa10□□□□□ -0.81
NPLOC4-220ENST00000576940 PSMA2P25787 234 aa10□□□□□ -0.81
NPLOC4-220ENST00000576940 NFKBIAP25963 317 aa10□□□□□ -0.81
NPLOC4-220ENST00000576940 LEPRP48357 1165 aaKnown RBP10□□□□□ -0.81
NPLOC4-220ENST00000576940 DNASE1L3Q13609 305 aa10□□□□□ -0.81
NPLOC4-220ENST00000576940 INPP5JQ15735 1006 aaPredicted RBP10□□□□□ -0.81
NPLOC4-220ENST00000576940 TCP11X2Q5H9J9 407 aa10□□□□□ -0.81
NPLOC4-220ENST00000576940 ARMC12Q5T9G4 340 aa10□□□□□ -0.81
NPLOC4-220ENST00000576940 CPZQ66K79 652 aa10□□□□□ -0.81
NPLOC4-220ENST00000576940 FAM199XQ6PEV8 388 aaPredicted RBP10□□□□□ -0.81
NPLOC4-220ENST00000576940 LYSMD3Q7Z3D4 306 aa10□□□□□ -0.81
NPLOC4-220ENST00000576940 NLRP8Q86W28 1048 aa10□□□□□ -0.81
NPLOC4-220ENST00000576940 CT55Q8WUE5 264 aa10□□□□□ -0.81
NPLOC4-220ENST00000576940 ZNF599Q96NL3 588 aa10□□□□□ -0.81
NPLOC4-220ENST00000576940 PLEKHG4BQ96PX9 1271 aa10□□□□□ -0.81
NPLOC4-220ENST00000576940 SNRNP25Q9BV90 132 aaKnown RBP10□□□□□ -0.81
NPLOC4-220ENST00000576940 LHX9Q9NQ69 397 aa10□□□□□ -0.81
NPLOC4-220ENST00000576940 ETNK2Q9NVF9 386 aa10□□□□□ -0.81
NPLOC4-220ENST00000576940 CWC15Q9P013 229 aaKnown RBP10□□□□□ -0.81
NPLOC4-220ENST00000576940 SCHIP1Q9P0W5 487 aaPredicted RBP10□□□□□ -0.81
NPLOC4-220ENST00000576940 LNPEPQ9UIQ6 1025 aa10□□□□□ -0.81
NPLOC4-220ENST00000576940 SRPK3Q9UPE1 567 aa10□□□□□ -0.81
NPLOC4-220ENST00000576940 PRRC2CQ9Y520 2896 aaKnown RBP9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 ARGFXA6NJG6 315 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 FZD6O60353 706 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 SORBS2O94875 1100 aaKnown RBP9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 TIAF1O95411 115 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 CLDN7O95471 211 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 FGF5P12034 268 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 F3P13726 295 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 AMD1P17707 334 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 POU3F2P20265 443 aaPredicted RBP9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 AMPD1P23109 780 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 CASP14P31944 242 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 RPS18P62269 152 aaKnown RBP9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 BECN1Q14457 450 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 IHHQ14623 411 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 IL11RAQ14626 422 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 DPCR1Q3MIW9 517 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 ZNF648Q5T619 568 aaPredicted RBP9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 ACAD10Q6JQN1 1059 aa9.99□□□□□ -0.81
NPLOC4-220ENST00000576940 USP45Q70EL2 814 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms