RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 PIGRP01833 764 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 IL6P05231 212 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 DCLRE1AQ6PJP8 1040 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 ZNF773Q6PK81 442 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 MYLPFQ96A32 169 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 PANX1Q96RD7 426 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 TPK1Q9H3S4 243 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 FBXO44Q9H4M3 255 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 MAFBQ9Y5Q3 323 aaPredicted RBP13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 KCPQ6ZWJ8 1503 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 SPATA31A6Q5VVP1 1343 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 SCELO95171 688 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 HOXC6P09630 235 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 YWHAQP27348 245 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 GPC1P35052 558 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 BLVRAP53004 296 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 RAB39AQ14964 217 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 ZNF284Q2VY69 593 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 UGT2A3Q6UWM9 527 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 SLC22A16Q86VW1 577 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 P2RX7Q99572 595 aaKnown RBP13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 VPS28Q9UK41 221 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 FZD10Q9ULW2 581 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 SSR3Q9UNL2 185 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 PMF1-BGLAPU3KQ54 211 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 SLIT2O94813 1529 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 SH3BGRLO75368 114 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 ATXN8OSP0DMR3 200 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 CDK4P11802 303 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 TUBA3CQ13748 450 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 NCBP2-AS2Q69YL0 99 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 ARMC8Q8IUR7 673 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 CYP4Z2PQ8N1L4 340 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 OR10A6Q8NH74 314 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 STARD8Q92502 1023 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 FCRL2Q96LA5 508 aaPredicted RBP13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 KLHL5Q96PQ7 755 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 TWNKQ96RR1 684 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 MIEF1Q9NQG6 463 aa13.06□□□□□ -0.32
PCDHGB3-201ENST00000576222 EFCAB9A8MZ26 197 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 DPYSL4O14531 572 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 ANXA5P08758 320 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 PTPRAP18433 802 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 SLC1A2P43004 574 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 CRATP43155 626 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 EEFSECP57772 596 aaKnown RBP13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 SKIV2LQ15477 1246 aaKnown RBP13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 CPSF6Q16630 551 aaKnown RBP eCLIP13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 CNSTQ6PJW8 725 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 CATSPERGQ6ZRH7 1159 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 NEK10Q6ZWH5 1172 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 ZC3HC1Q86WB0 502 aaKnown RBP13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 ZC3H7AQ8IWR0 971 aaKnown RBP13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 PIK3C3Q8NEB9 887 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 WDR36Q8NI36 951 aaKnown RBP13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 LRRC3Q9BY71 257 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 EBF1Q9UH73 591 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 SNX6Q9UNH7 406 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 ST14Q9Y5Y6 855 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 NALCNQ8IZF0 1738 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 CAPN14A8MX76 684 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 H0YC42 278 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 ZBTB14O43829 449 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 GSK3BP49841 420 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 SRP54P61011 504 aaKnown RBP13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 SNAPC2Q13487 334 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 RFTN1Q14699 578 aaPredicted RBP13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 FAM131AQ6UXB0 335 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 TMEM110Q86TL2 294 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 PQLC3Q8N755 202 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 FEM1CQ96JP0 617 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 Q96MT0 163 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 AKTIPQ9H8T0 292 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 USP29Q9HBJ7 922 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 TLR8Q9NR97 1041 aaKnown RBP13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 H0YJX3 145 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 PLK4O00444 970 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 IFRD1O00458 451 aaPredicted RBP13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 BTN3A3O00478 584 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 FGF1P05230 155 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 CCR10P46092 362 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 GPR15P49685 360 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 MTPNP58546 118 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 RPS7P62081 194 aaKnown RBP13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 PHC1P78364 1004 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 DNASE1L3Q13609 305 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 CHST15Q7LFX5 561 aaPredicted RBP13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 GRPEL2Q8TAA5 225 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 TBATAQ96M53 351 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 PEBP4Q96S96 227 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 DIABLOQ9NR28 239 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 A8MT66 165 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 SORBS2O94875 1100 aaKnown RBP13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 UROSP10746 265 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 DPEP1P16444 411 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 CYP2A7P20853 494 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 IL18R1Q13478 541 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 COLEC12Q5KU26 742 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 C9orf57Q5W0N0 161 aa13.05□□□□□ -0.32
PCDHGB3-201ENST00000576222 CLHC1Q8NHS4 586 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms