RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 IL9RQ01113 521 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 BNIP3Q12983 259 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 MSLNQ13421 630 aaPredicted RBP10.96□□□□□ -0.65
CHD3-216ENST00000573936 OLIG2Q13516 323 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 SYDE1Q6ZW31 735 aaPredicted RBP10.96□□□□□ -0.65
CHD3-216ENST00000573936 PRUNE1Q86TP1 453 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 NAXDQ8IW45 347 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 PHACTR4Q8IZ21 702 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 PELI3Q8N2H9 469 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 SDR16C5Q8N3Y7 309 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 FSTL5Q8N475 847 aaPredicted RBP10.96□□□□□ -0.65
CHD3-216ENST00000573936 RHBDD1Q8TEB9 315 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 SETD7Q8WTS6 366 aaKnown RBP10.96□□□□□ -0.65
CHD3-216ENST00000573936 CDC6Q99741 560 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 DUSP23Q9BVJ7 150 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 BPIFA1Q9NP55 256 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 APOBEC3BQ9UH17 382 aaKnown RBP10.96□□□□□ -0.65
CHD3-216ENST00000573936 PCYOX1Q9UHG3 505 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 APPL1Q9UKG1 709 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 ARL5AQ9Y689 179 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 DGKBQ9Y6T7 804 aa10.96□□□□□ -0.65
CHD3-216ENST00000573936 AQP9O43315 295 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 SH3BP5O60239 455 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 SOD1P00441 154 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 IVLP07476 585 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 TPSB2P20231 275 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 NPY2RP49146 381 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 GPS1Q13098 491 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 PEX6Q13608 980 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 ITGA9Q13797 1035 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 ELOCQ15369 112 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 PPP1R7Q15435 360 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 TRIP13Q15645 432 aaPredicted RBP10.95□□□□□ -0.66
CHD3-216ENST00000573936 TPSAB1Q15661 275 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 ALG11Q2TAA5 492 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 ZNF542PQ5EBM4 170 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 TPRG1LQ5T0D9 272 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 ALS2CLQ60I27 953 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 KDM7AQ6ZMT4 941 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 NLRP9Q7RTR0 991 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 PCGF5Q86SE9 256 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 GATAD2AQ86YP4 633 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 HID1Q8IV36 788 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 CHCHD4Q8N4Q1 142 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 OR4K2Q8NGD2 314 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 OR52K1Q8NGK4 314 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 KIF18AQ8NI77 898 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 STYXQ8WUJ0 223 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 SLCO2A1Q92959 643 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 TSACCQ96A04 125 aaPredicted RBP10.95□□□□□ -0.66
CHD3-216ENST00000573936 COX14Q96I36 57 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 VPS35Q96QK1 796 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 AGAP2Q99490 1192 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 LGR4Q9BXB1 951 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 FRMD8Q9BZ67 464 aaPredicted RBP10.95□□□□□ -0.66
CHD3-216ENST00000573936 RMI1Q9H9A7 625 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 CASS4Q9NQ75 786 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 MOSPD1Q9UJG1 213 aa10.95□□□□□ -0.66
CHD3-216ENST00000573936 GLYATL1P3A0A0U1RQE8 302 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 PRSS38A1L453 326 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 HEATR9A2RTY3 570 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 TMEM202A6NGA9 273 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 GPR89AB7ZAQ6 455 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 TPP1O14773 563 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 SCAMP1O15126 338 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 INPP4BO15327 924 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 SDC3O75056 442 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 SLC25A14O95258 325 aaPredicted RBP10.94□□□□□ -0.66
CHD3-216ENST00000573936 ASMTLO95671 621 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 CEACAM5P06731 702 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 GPR89BP0CG08 455 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 TPH1P17752 444 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 ADRA1DP25100 572 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 MAGEA6P43360 314 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 VPS41P49754 854 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 TUBB2AQ13885 445 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 POU6F1Q14863 301 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 SKIDA1Q1XH10 827 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 PRRT3Q5FWE3 981 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 ARMC3Q5W041 872 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 LRRC8BQ6P9F7 803 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 LVRNQ6Q4G3 990 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 C19orf48Q6RUI8 117 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 KANSL1Q7Z3B3 1105 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 RD3Q7Z3Z2 195 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 GKN2Q86XP6 184 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 PHYKPLQ8IUZ5 450 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 LMX1AQ8TE12 382 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 SCG3Q8WXD2 468 aaKnown RBP10.94□□□□□ -0.66
CHD3-216ENST00000573936 OR1E3Q8WZA6 343 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 GLYATL1Q969I3 302 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 SCARF2Q96GP6 870 aaPredicted RBP10.94□□□□□ -0.66
CHD3-216ENST00000573936 RANBP9Q96S59 729 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 TUBB2BQ9BVA1 445 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 DDX47Q9H0S4 455 aaKnown RBP10.94□□□□□ -0.66
CHD3-216ENST00000573936 TRIM39Q9HCM9 518 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 CYP4F12Q9HCS2 524 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 IL26Q9NPH9 171 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 EVA1BQ9NVM1 165 aa10.94□□□□□ -0.66
CHD3-216ENST00000573936 NLE1Q9NVX2 485 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms