RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 LRRC69Q6ZNQ3 347 aa17.29■□□□□ 0.36
SMG6-214ENST00000573827 GPR26Q8NDV2 337 aa17.29■□□□□ 0.36
SMG6-214ENST00000573827 ADGRE3Q9BY15 652 aa17.29■□□□□ 0.36
SMG6-214ENST00000573827 SYNDIG1Q9H7V2 258 aa17.29■□□□□ 0.36
SMG6-214ENST00000573827 MAGEE1Q9HCI5 957 aa17.29■□□□□ 0.36
SMG6-214ENST00000573827 SEPT10Q9P0V9 454 aa17.29■□□□□ 0.36
SMG6-214ENST00000573827 EPN1Q9Y6I3 576 aaPredicted RBP17.29■□□□□ 0.36
SMG6-214ENST00000573827 DUSP10Q9Y6W6 482 aa17.29■□□□□ 0.36
SMG6-214ENST00000573827 BSNQ9UPA5 3926 aa17.29■□□□□ 0.36
SMG6-214ENST00000573827 SPTA1P02549 2419 aa17.29■□□□□ 0.36
SMG6-214ENST00000573827 LOC285095A0A1B0GVY8 99 aa17.28■□□□□ 0.36
SMG6-214ENST00000573827 PLD2O14939 933 aa17.28■□□□□ 0.36
SMG6-214ENST00000573827 AURKAO14965 403 aa17.28■□□□□ 0.36
SMG6-214ENST00000573827 TNFSF15O95150 251 aa17.28■□□□□ 0.36
SMG6-214ENST00000573827 NDUFA10O95299 355 aa17.28■□□□□ 0.36
SMG6-214ENST00000573827 ATP1A1P05023 1023 aaKnown RBP17.28■□□□□ 0.36
SMG6-214ENST00000573827 UGT1A5P35504 534 aa17.28■□□□□ 0.36
SMG6-214ENST00000573827 ACTR1BP42025 376 aa17.28■□□□□ 0.36
SMG6-214ENST00000573827 OR1D5P58170 312 aa17.28■□□□□ 0.36
SMG6-214ENST00000573827 DCDC1P59894 354 aa17.28■□□□□ 0.36
SMG6-214ENST00000573827 ACTR1AP61163 376 aa17.28■□□□□ 0.36
SMG6-214ENST00000573827 CFHR1Q03591 330 aa17.28■□□□□ 0.36
SMG6-214ENST00000573827 EIF3IQ13347 325 aaKnown RBP17.28■□□□□ 0.36
SMG6-214ENST00000573827 LRP8Q14114 963 aa17.28■□□□□ 0.36
SMG6-214ENST00000573827 PPP2R5EQ16537 467 aa17.28■□□□□ 0.36
SMG6-214ENST00000573827 BBS12Q6ZW61 710 aa17.28■□□□□ 0.36
SMG6-214ENST00000573827 MARK2Q7KZI7 788 aaKnown RBP17.28■□□□□ 0.36
SMG6-214ENST00000573827 KDELC2Q7Z4H8 507 aa17.28■□□□□ 0.36
SMG6-214ENST00000573827 RCOR2Q8IZ40 523 aa17.28■□□□□ 0.36
SMG6-214ENST00000573827 OXNAD1Q96HP4 312 aaPredicted RBP17.28■□□□□ 0.36
SMG6-214ENST00000573827 QKIQ96PU8 341 aaKnown RBP eCLIP17.28■□□□□ 0.36
SMG6-214ENST00000573827 LACRTQ9GZZ8 138 aa17.28■□□□□ 0.36
SMG6-214ENST00000573827 CDH19Q9H159 772 aa17.28■□□□□ 0.36
SMG6-214ENST00000573827 ZFYVE1Q9HBF4 777 aa17.28■□□□□ 0.36
SMG6-214ENST00000573827 PKD2L2Q9NZM6 624 aa17.28■□□□□ 0.36
SMG6-214ENST00000573827 TMPRSS11EQ9UL52 423 aa17.28■□□□□ 0.36
SMG6-214ENST00000573827 SHOC2Q9UQ13 582 aa17.28■□□□□ 0.36
SMG6-214ENST00000573827 ZNF711Q9Y462 761 aa17.28■□□□□ 0.36
SMG6-214ENST00000573827 PCDHGA7Q9Y5G6 932 aa17.28■□□□□ 0.36
SMG6-214ENST00000573827 PRR19A6NJB7 356 aa17.27■□□□□ 0.36
SMG6-214ENST00000573827 TMX2-CTNND1H3BSU7 103 aa17.27■□□□□ 0.36
SMG6-214ENST00000573827 ZRANB2O95218 330 aaKnown RBP eCLIP17.27■□□□□ 0.36
SMG6-214ENST00000573827 NDST3O95803 873 aa17.27■□□□□ 0.36
SMG6-214ENST00000573827 HGFP14210 728 aa17.27■□□□□ 0.36
SMG6-214ENST00000573827 CD1CP29017 333 aa17.27■□□□□ 0.36
SMG6-214ENST00000573827 RBMS1P29558 406 aaKnown RBP17.27■□□□□ 0.36
SMG6-214ENST00000573827 SQSTM1Q13501 440 aa17.27■□□□□ 0.36
SMG6-214ENST00000573827 KAZNQ674X7 775 aa17.27■□□□□ 0.36
SMG6-214ENST00000573827 PCSK4Q6UW60 755 aa17.27■□□□□ 0.36
SMG6-214ENST00000573827 RAB11FIP2Q7L804 512 aa17.27■□□□□ 0.36
SMG6-214ENST00000573827 GALNT13Q8IUC8 556 aa17.27■□□□□ 0.36
SMG6-214ENST00000573827 TMEM139Q8IV31 216 aa17.27■□□□□ 0.36
SMG6-214ENST00000573827 ZNF567Q8N184 647 aa17.27■□□□□ 0.36
SMG6-214ENST00000573827 SFRP1Q8N474 314 aa17.27■□□□□ 0.36
SMG6-214ENST00000573827 TFB1MQ8WVM0 346 aaKnown RBP17.27■□□□□ 0.36
SMG6-214ENST00000573827 NAF1Q96HR8 494 aaKnown RBP17.27■□□□□ 0.36
SMG6-214ENST00000573827 TMEM74Q96NL1 305 aa17.27■□□□□ 0.36
SMG6-214ENST00000573827 GORASP1Q9BQQ3 440 aa17.27■□□□□ 0.36
SMG6-214ENST00000573827 NUDT22Q9BRQ3 303 aa17.27■□□□□ 0.36
SMG6-214ENST00000573827 SEMA6CQ9H3T2 930 aa17.27■□□□□ 0.36
SMG6-214ENST00000573827 EPB41L5Q9HCM4 733 aa17.27■□□□□ 0.36
SMG6-214ENST00000573827 ACSL6Q9UKU0 697 aa17.27■□□□□ 0.36
SMG6-214ENST00000573827 PRKAB1Q9Y478 270 aa17.27■□□□□ 0.36
SMG6-214ENST00000573827 BTNL10A8MVZ5 291 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 PMPCBO75439 489 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 BPIP17213 487 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 NFKB1P19838 968 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 CSF2RBP32927 897 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 CTNNA1P35221 906 aaKnown RBP17.26■□□□□ 0.35
SMG6-214ENST00000573827 CYLC1P35663 651 aaPredicted RBP17.26■□□□□ 0.35
SMG6-214ENST00000573827 GPR3P46089 330 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 FASLGP48023 281 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 WNT3AP56704 352 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 C16orf72Q14CZ0 275 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 NOMO1Q15155 1222 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 SPA17Q15506 151 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 PCSK7Q16549 785 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.26■□□□□ 0.35
SMG6-214ENST00000573827 BZW1Q7L1Q6 419 aaKnown RBP17.26■□□□□ 0.35
SMG6-214ENST00000573827 TMTC1Q8IUR5 882 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 FBXO39Q8N4B4 442 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 TTC30BQ8N4P2 665 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 LRRC57Q8N9N7 239 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 CCHCR1Q8TD31 782 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 SLC37A2Q8TED4 501 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 SNRNP27Q8WVK2 155 aaKnown RBP17.26■□□□□ 0.35
SMG6-214ENST00000573827 KCNE4Q8WWG9 221 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 HAUS1Q96CS2 278 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 MRGPRX2Q96LB1 330 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 FCRL3Q96P31 734 aaPredicted RBP17.26■□□□□ 0.35
SMG6-214ENST00000573827 DPH1Q9BZG8 443 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 RDH14Q9HBH5 336 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 UBP1Q9NZI7 540 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 ATXN10Q9UBB4 475 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 TBC1D29Q9UFV1 150 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 COL6A6A6NMZ7 2263 aa17.26■□□□□ 0.35
SMG6-214ENST00000573827 PJA2O43164 708 aa17.25■□□□□ 0.35
SMG6-214ENST00000573827 NUAK1O60285 661 aa17.25■□□□□ 0.35
SMG6-214ENST00000573827 CPNE6O95741 557 aa17.25■□□□□ 0.35
SMG6-214ENST00000573827 EPOP01588 193 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms