RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 SPATA16Q9BXB7 569 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 SLC13A1Q9BZW2 595 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 TCEAL2Q9H3H9 227 aaPredicted RBP13.46□□□□□ -0.25
RPAIN-213ENST00000573577 NLGN3Q9NZ94 848 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 CDC23Q9UJX2 597 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 CSNK1G3Q9Y6M4 447 aa13.46□□□□□ -0.25
RPAIN-213ENST00000573577 K7ESM1 405 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 AURKAO14965 403 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 URI1O94763 535 aaPredicted RBP13.45□□□□□ -0.26
RPAIN-213ENST00000573577 BPIP17213 487 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 CKMT2P17540 419 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 SPAM1P38567 509 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 HADHAP40939 763 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 ACADVLP49748 655 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 HK3P52790 923 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 CDK3Q00526 305 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 DR1Q01658 176 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 DHX34Q14147 1143 aaKnown RBP13.45□□□□□ -0.26
RPAIN-213ENST00000573577 ALG11Q2TAA5 492 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 CCDC157Q569K6 752 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 PRRT3Q5FWE3 981 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 ADAMTSL4Q6UY14 1074 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 RFLNAQ6ZTI6 216 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 HEATR4Q86WZ0 1026 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 PELI3Q8N2H9 469 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 TRAM1L1Q8N609 369 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 OR52K1Q8NGK4 314 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 KIF18AQ8NI77 898 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 DTX3LQ8TDB6 740 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 LMX1AQ8TE12 382 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 LRRC61Q9BV99 259 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 TEX101Q9BY14 249 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 BPIFA1Q9NP55 256 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 IL17CQ9P0M4 197 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 SPASTQ9UBP0 616 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 KLQ9UEF7 1012 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 ASIC3Q9UHC3 531 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 KLK13Q9UKR3 277 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 NEU2Q9Y3R4 380 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 NEUROG3Q9Y4Z2 214 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 PCDHGA1Q9Y5H4 931 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 ARL5AQ9Y689 179 aa13.45□□□□□ -0.26
RPAIN-213ENST00000573577 TMEM202A6NGA9 273 aa13.44□□□□□ -0.26
RPAIN-213ENST00000573577 TNFRSF10CO14798 259 aa13.44□□□□□ -0.26
RPAIN-213ENST00000573577 RFPL3O75679 317 aa13.44□□□□□ -0.26
RPAIN-213ENST00000573577 RASGRP1O95267 797 aa13.44□□□□□ -0.26
RPAIN-213ENST00000573577 ADCY8P40145 1251 aa13.44□□□□□ -0.26
RPAIN-213ENST00000573577 MAGEA6P43360 314 aa13.44□□□□□ -0.26
RPAIN-213ENST00000573577 SRP54P61011 504 aaKnown RBP13.44□□□□□ -0.26
RPAIN-213ENST00000573577 MSLNQ13421 630 aaPredicted RBP13.44□□□□□ -0.26
RPAIN-213ENST00000573577 ITGA9Q13797 1035 aa13.44□□□□□ -0.26
RPAIN-213ENST00000573577 PTK6Q13882 451 aa13.44□□□□□ -0.26
RPAIN-213ENST00000573577 SEPT6Q14141 434 aa13.44□□□□□ -0.26
RPAIN-213ENST00000573577 KCNJ11Q14654 390 aa13.44□□□□□ -0.26
RPAIN-213ENST00000573577 POU6F1Q14863 301 aa13.44□□□□□ -0.26
RPAIN-213ENST00000573577 WHAMMP3Q1A5X7 153 aa13.44□□□□□ -0.26
RPAIN-213ENST00000573577 ALS2CLQ60I27 953 aa13.44□□□□□ -0.26
RPAIN-213ENST00000573577 ENPP7Q6UWV6 458 aa13.44□□□□□ -0.26
RPAIN-213ENST00000573577 PCGF5Q86SE9 256 aa13.44□□□□□ -0.26
RPAIN-213ENST00000573577 HID1Q8IV36 788 aa13.44□□□□□ -0.26
RPAIN-213ENST00000573577 GPR26Q8NDV2 337 aa13.44□□□□□ -0.26
RPAIN-213ENST00000573577 SPATA4Q8NEY3 305 aa13.44□□□□□ -0.26
RPAIN-213ENST00000573577 OR56A4Q8NGH8 313 aa13.44□□□□□ -0.26
RPAIN-213ENST00000573577 TSACCQ96A04 125 aaPredicted RBP13.44□□□□□ -0.26
RPAIN-213ENST00000573577 PDXPQ96GD0 296 aa13.44□□□□□ -0.26
RPAIN-213ENST00000573577 HIC2Q96JB3 615 aa13.44□□□□□ -0.26
RPAIN-213ENST00000573577 DUSP23Q9BVJ7 150 aa13.44□□□□□ -0.26
RPAIN-213ENST00000573577 LGR4Q9BXB1 951 aa13.44□□□□□ -0.26
RPAIN-213ENST00000573577 CASS4Q9NQ75 786 aa13.44□□□□□ -0.26
RPAIN-213ENST00000573577 APPL1Q9UKG1 709 aa13.44□□□□□ -0.26
RPAIN-213ENST00000573577 CEP295Q9C0D2 2601 aa13.44□□□□□ -0.26
RPAIN-213ENST00000573577 GLYATL1P3A0A0U1RQE8 302 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 HEATR9A2RTY3 570 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 FAM221BA6H8Z2 402 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 LMO7DNF2Z398 122 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 TPP1O14773 563 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 NDC80O14777 642 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 SOD1P00441 154 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 CDK4P11802 303 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 TPH1P17752 444 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 ACP1P24666 158 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 DAB2P98082 770 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 ILKQ13418 452 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 C1orf61Q13536 156 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 ELOCQ15369 112 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 SKIDA1Q1XH10 827 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 DEFB133Q30KQ1 61 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 KCTD16Q68DU8 428 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 ZCCHC8Q6NZY4 707 aaKnown RBP13.43□□□□□ -0.26
RPAIN-213ENST00000573577 LRRC8BQ6P9F7 803 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 NLRP9Q7RTR0 991 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 RD3Q7Z3Z2 195 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 MAATS1Q7Z4T9 603 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 JAMLQ86YT9 394 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 FSTL5Q8N475 847 aaPredicted RBP13.43□□□□□ -0.26
RPAIN-213ENST00000573577 FAM181AQ8N9Y4 354 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 OR4K2Q8NGD2 314 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 STYXQ8WUJ0 223 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 OR1E3Q8WZA6 343 aa13.43□□□□□ -0.26
RPAIN-213ENST00000573577 CNTNAP3BQ96NU0 1288 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms