RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 GNA12Q03113 381 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 DYNC1I2Q13409 638 aaKnown RBP11.16□□□□□ -0.62
RPAIN-212ENST00000573126 APOFQ13790 326 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 FAM26DQ5JW98 314 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 KRT80Q6KB66 452 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 UGT3A1Q6NUS8 523 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 PEX13Q92968 403 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 KIAA1191Q96A73 305 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 ASB2Q96Q27 587 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 CINPQ9BW66 212 aaPredicted RBP11.16□□□□□ -0.62
RPAIN-212ENST00000573126 NACA2Q9H009 215 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 CAAP1Q9H8G2 361 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 BPIFA1Q9NP55 256 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 SDR39U1Q9NRG7 319 aaPredicted RBP11.16□□□□□ -0.62
RPAIN-212ENST00000573126 NDUFA13Q9P0J0 144 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 PCDHGC4Q9Y5F7 938 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 BBIP1A8MTZ0 92 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 PDLIM1O00151 329 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 BAIAP3O94812 1187 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 HOXB8P17481 243 aaPredicted RBP11.16□□□□□ -0.62
RPAIN-212ENST00000573126 SLC6A2P23975 617 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 RPL10P27635 214 aaKnown RBP11.16□□□□□ -0.62
RPAIN-212ENST00000573126 OXTRP30559 389 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 CASP2P42575 452 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 PTPRNQ16849 979 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 TBCELQ5QJ74 424 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 PIANPQ8IYJ0 282 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 ABI1Q8IZP0 508 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 LPCAT1Q8NF37 534 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 DNAJB14Q8TBM8 379 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 FUBP1Q96AE4 644 aaKnown RBP11.16□□□□□ -0.62
RPAIN-212ENST00000573126 ACOX2Q99424 681 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 MGME1Q9BQP7 344 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 OSBPL11Q9BXB4 747 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 RBM38Q9H0Z9 239 aaKnown RBP11.16□□□□□ -0.62
RPAIN-212ENST00000573126 SYTL2Q9HCH5 934 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 DDX18Q9NVP1 670 aaKnown RBP11.16□□□□□ -0.62
RPAIN-212ENST00000573126 CMTM6Q9NX76 183 aa11.16□□□□□ -0.62
RPAIN-212ENST00000573126 TSR3Q9UJK0 312 aaKnown RBP11.16□□□□□ -0.62
RPAIN-212ENST00000573126 ANKRD12Q6UB98 2062 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 HTRA2O43464 458 aaPredicted RBP11.15□□□□□ -0.62
RPAIN-212ENST00000573126 NIPSNAP2O75323 286 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 PRKCQQ04759 706 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 RING1Q06587 406 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 RAD51Q06609 339 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 LAMB3Q13751 1172 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 RABL3Q5HYI8 236 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 RTP2Q5QGT7 225 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 ANKS6Q68DC2 871 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 PSAPL1Q6NUJ1 521 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 CARM1Q86X55 608 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 EFHBQ8N7U6 833 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 SIDT2Q8NBJ9 832 aaKnown RBP11.15□□□□□ -0.62
RPAIN-212ENST00000573126 TTC16Q8NEE8 873 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 LRRC58Q96CX6 371 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 PSKH2Q96QS6 385 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 C1orf50Q9BV19 199 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 DERL2Q9GZP9 239 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 OCEL1Q9H607 264 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 POPDC3Q9HBV1 291 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 NLE1Q9NVX2 485 aaPredicted RBP11.15□□□□□ -0.62
RPAIN-212ENST00000573126 PLK2Q9NYY3 685 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 ABCD2Q9UBJ2 740 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 SEPT3Q9UH03 358 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 ASB1Q9Y576 335 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 SQORQ9Y6N5 450 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 MKI67P46013 3256 aaKnown RBP11.15□□□□□ -0.62
RPAIN-212ENST00000573126 DHRS12A0PJE2 317 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 ARHGAP10A1A4S6 786 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 LCHNA4D1U4 455 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 CBX4O00257 560 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 PRLP01236 227 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 MTHFD1P11586 935 aaKnown RBP11.15□□□□□ -0.62
RPAIN-212ENST00000573126 TXNL4AP83876 142 aaKnown RBP11.15□□□□□ -0.62
RPAIN-212ENST00000573126 MAP7Q14244 749 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 FUT11Q495W5 492 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 TRAF7Q6Q0C0 670 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 ERMP1Q7Z2K6 904 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 TMEM173Q86WV6 379 aaPredicted RBP11.15□□□□□ -0.62
RPAIN-212ENST00000573126 DENND1CQ8IV53 801 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 BBS5Q8N3I7 341 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 CBR4Q8N4T8 237 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 TSPAN14Q8NG11 270 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 BIRC8Q96P09 236 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 UHRF1Q96T88 793 aaPredicted RBP11.15□□□□□ -0.62
RPAIN-212ENST00000573126 HOPXQ9BPY8 73 aaPredicted RBP11.15□□□□□ -0.62
RPAIN-212ENST00000573126 SARS2Q9NP81 518 aaKnown RBP11.15□□□□□ -0.62
RPAIN-212ENST00000573126 INTS10Q9NVR2 710 aaKnown RBP11.15□□□□□ -0.62
RPAIN-212ENST00000573126 UBA2Q9UBT2 640 aaPredicted RBP11.15□□□□□ -0.62
RPAIN-212ENST00000573126 ZNF225Q9UK10 706 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 VWA8A3KMH1 1905 aa11.15□□□□□ -0.62
RPAIN-212ENST00000573126 OR6C75A6NL08 312 aa11.15□□□□□ -0.63
RPAIN-212ENST00000573126 H3BSA7 217 aa11.15□□□□□ -0.63
RPAIN-212ENST00000573126 SCAMP3O14828 347 aaKnown RBP11.15□□□□□ -0.63
RPAIN-212ENST00000573126 GJB5O95377 273 aa11.15□□□□□ -0.63
RPAIN-212ENST00000573126 GNAO1P09471 354 aa11.15□□□□□ -0.63
RPAIN-212ENST00000573126 IDO1P14902 403 aa11.15□□□□□ -0.63
RPAIN-212ENST00000573126 ATF6P18850 670 aa11.15□□□□□ -0.63
RPAIN-212ENST00000573126 ARL1P40616 181 aaPredicted RBP11.15□□□□□ -0.63
RPAIN-212ENST00000573126 SGSHP51688 502 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms