RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 ASIC2Q16515 512 aa9.78□□□□□ -0.84
TRAPPC1-205ENST00000572656 DEFB109BQ30KR1 87 aa9.78□□□□□ -0.84
TRAPPC1-205ENST00000572656 ALG1LQ6GMV1 187 aa9.78□□□□□ -0.84
TRAPPC1-205ENST00000572656 SASS6Q6UVJ0 657 aa9.78□□□□□ -0.84
TRAPPC1-205ENST00000572656 CHST15Q7LFX5 561 aaPredicted RBP9.78□□□□□ -0.84
TRAPPC1-205ENST00000572656 LYSMD3Q7Z3D4 306 aa9.78□□□□□ -0.84
TRAPPC1-205ENST00000572656 ZNF571Q7Z3V5 609 aaPredicted RBP9.78□□□□□ -0.84
TRAPPC1-205ENST00000572656 KDELC2Q7Z4H8 507 aa9.78□□□□□ -0.84
TRAPPC1-205ENST00000572656 SLC9B2Q86UD5 537 aa9.78□□□□□ -0.84
TRAPPC1-205ENST00000572656 TEKT4Q8WW24 435 aa9.78□□□□□ -0.84
TRAPPC1-205ENST00000572656 STARD8Q92502 1023 aa9.78□□□□□ -0.84
TRAPPC1-205ENST00000572656 HERPUD2Q9BSE4 406 aa9.78□□□□□ -0.84
TRAPPC1-205ENST00000572656 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.78□□□□□ -0.84
TRAPPC1-205ENST00000572656 POLR1EQ9GZS1 481 aaKnown RBP9.78□□□□□ -0.84
TRAPPC1-205ENST00000572656 HSD3B7Q9H2F3 369 aa9.78□□□□□ -0.84
TRAPPC1-205ENST00000572656 EPB41L1Q9H4G0 881 aa9.78□□□□□ -0.84
TRAPPC1-205ENST00000572656 RMI1Q9H9A7 625 aa9.78□□□□□ -0.84
TRAPPC1-205ENST00000572656 APMAPQ9HDC9 416 aa9.78□□□□□ -0.84
TRAPPC1-205ENST00000572656 LMBRD1Q9NUN5 540 aa9.78□□□□□ -0.84
TRAPPC1-205ENST00000572656 AIPL1Q9NZN9 384 aa9.78□□□□□ -0.84
TRAPPC1-205ENST00000572656 MYO1AQ9UBC5 1043 aa9.78□□□□□ -0.84
TRAPPC1-205ENST00000572656 CNOT6Q9ULM6 557 aaKnown RBP9.78□□□□□ -0.84
TRAPPC1-205ENST00000572656 PRKAB1Q9Y478 270 aa9.78□□□□□ -0.84
TRAPPC1-205ENST00000572656 PCYT1BQ9Y5K3 369 aaPredicted RBP9.78□□□□□ -0.84
TRAPPC1-205ENST00000572656 LRRK1Q38SD2 2015 aa9.78□□□□□ -0.84
TRAPPC1-205ENST00000572656 PTPN13Q12923 2485 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 KIR2DS5A0A0G2JLQ3 304 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 A0A0G2JNG1 304 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 A6NCN8 305 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 OR5K4A6NMS3 321 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 KIR2DS3K7RE56 304 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 DDX3XO00571 662 aaKnown RBP eCLIP9.77□□□□□ -0.855e-28■■■■■ 29.1
TRAPPC1-205ENST00000572656 CLDN7O95471 211 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 PRLP01236 227 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 ATP1A1P05023 1023 aaKnown RBP9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 ANKRD34CP0C6C1 535 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 F3P13726 295 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 TCN2P20062 427 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 PRKCIP41743 596 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 STAT5AP42229 794 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 MAPK9P45984 424 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 NOP2P46087 812 aaKnown RBP9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 RPL26P61254 145 aaKnown RBP9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 SEPT6Q14141 434 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 MAP7Q14244 749 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 PIGHQ14442 188 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 IHHQ14623 411 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 KIR2DS5Q14953 304 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 STX1AQ16623 288 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 LACTB2Q53H82 288 aaPredicted RBP9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 TXNRD3NBQ6F5E7 133 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 PLXDC1Q8IUK5 500 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 ESX1Q8N693 406 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 AVL9Q8NBF6 648 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 MAML1Q92585 1016 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 LYSMD1Q96S90 227 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 TDRD1Q9BXT4 1180 aaKnown RBP9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 ISCUQ9H1K1 167 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 PCDH18Q9HCL0 1135 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 CPNE7Q9UBL6 633 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 KLHL3Q9UH77 587 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 RPL26L1Q9UNX3 145 aaKnown RBP9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 KCNK6Q9Y257 313 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 CHKBQ9Y259 395 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 MAN2B2Q9Y2E5 1009 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 KCTD3Q9Y597 815 aa9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 OAS3Q9Y6K5 1087 aaKnown RBP9.77□□□□□ -0.85
TRAPPC1-205ENST00000572656 ANKRD36A6QL64 1941 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 RGSL1A5PLK6 1076 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 PRR19A6NJB7 356 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 MATN3O15232 486 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 SNX2O60749 519 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 ACP5P13686 325 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 CA4P22748 312 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 IL4RP24394 825 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 GARSP41250 739 aaKnown RBP9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 SPINT3P49223 89 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 ZNF165P49910 485 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 CLCNKAP51800 687 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 DSC2Q02487 901 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 SLC25A11Q02978 314 aaKnown RBP9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 KLHL30Q0D2K2 578 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 GALNT2Q10471 571 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 KLRB1Q12918 225 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 HENMT1Q5T8I9 393 aaKnown RBP9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 C16orf46Q6P387 395 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 CLEC17AQ6ZS10 378 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 FAM26EQ8N5C1 309 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 NIPA2Q8N8Q9 360 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 ARRDC2Q8TBH0 407 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 FATE1Q969F0 183 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 WDR24Q96S15 920 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 TBC1D10AQ9BXI6 508 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 CARD9Q9H257 536 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 FAM83DQ9H4H8 585 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 UCK1Q9HA47 277 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 RTN4Q9NQC3 1192 aaKnown RBP9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 HAUS2Q9NVX0 235 aa9.76□□□□□ -0.85
TRAPPC1-205ENST00000572656 RBM22Q9NW64 420 aaKnown RBP eCLIP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms