RNA–Protein interactions for RNA: ENST00000570978.1

AC055872.1-201, humanhuman

BASIC

Gene AC055872.1, Length 278 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055872.1-201ENST00000570978 ZNF667Q5HYK9 610 aa1.96□□□□□ -2.1
AC055872.1-201ENST00000570978 FBXO47Q5MNV8 452 aa1.96□□□□□ -2.1
AC055872.1-201ENST00000570978 C6orf141Q5SZD1 244 aa1.96□□□□□ -2.1
AC055872.1-201ENST00000570978 ANKRD54Q6NXT1 300 aa1.96□□□□□ -2.1
AC055872.1-201ENST00000570978 BRAT1Q6PJG6 821 aa1.96□□□□□ -2.1
AC055872.1-201ENST00000570978 RBMS3Q6XE24 437 aaKnown RBP1.96□□□□□ -2.1
AC055872.1-201ENST00000570978 TRPT1Q86TN4 253 aaKnown RBP1.96□□□□□ -2.1
AC055872.1-201ENST00000570978 LONP2Q86WA8 852 aa1.96□□□□□ -2.1
AC055872.1-201ENST00000570978 FOXRED2Q8IWF2 684 aa1.96□□□□□ -2.1
AC055872.1-201ENST00000570978 DHX40Q8IX18 779 aaKnown RBP1.96□□□□□ -2.1
AC055872.1-201ENST00000570978 SPICE1Q8N0Z3 855 aa1.96□□□□□ -2.1
AC055872.1-201ENST00000570978 ADSSL1Q8N142 457 aa1.96□□□□□ -2.1
AC055872.1-201ENST00000570978 DDHD1Q8NEL9 900 aa1.96□□□□□ -2.1
AC055872.1-201ENST00000570978 OR2AK2Q8NG84 335 aa1.96□□□□□ -2.1
AC055872.1-201ENST00000570978 THAP6Q8TBB0 222 aa1.96□□□□□ -2.1
AC055872.1-201ENST00000570978 RILPL2Q969X0 211 aa1.96□□□□□ -2.1
AC055872.1-201ENST00000570978 TMEM47Q9BQJ4 181 aa1.96□□□□□ -2.1
AC055872.1-201ENST00000570978 MCRIP2Q9BUT9 160 aaKnown RBP1.96□□□□□ -2.1
AC055872.1-201ENST00000570978 USP44Q9H0E7 712 aa1.96□□□□□ -2.1
AC055872.1-201ENST00000570978 SIL1Q9H173 461 aa1.96□□□□□ -2.1
AC055872.1-201ENST00000570978 ZBTB20Q9HC78 741 aaPredicted RBP1.96□□□□□ -2.1
AC055872.1-201ENST00000570978 DDX4Q9NQI0 724 aaKnown RBP1.96□□□□□ -2.1
AC055872.1-201ENST00000570978 MPP6Q9NZW5 540 aa1.96□□□□□ -2.1
AC055872.1-201ENST00000570978 ZKSCAN7Q9P0L1 754 aaPredicted RBP1.96□□□□□ -2.1
AC055872.1-201ENST00000570978 MRPS28Q9Y2Q9 187 aaKnown RBP1.96□□□□□ -2.1
AC055872.1-201ENST00000570978 CEPT1Q9Y6K0 416 aa1.96□□□□□ -2.1
AC055872.1-201ENST00000570978 A0A1B0GVY2 172 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 NR5A2O00482 541 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 TNPO2O14787 897 aaKnown RBP1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 EIF3DO15371 548 aaKnown RBP eCLIP1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 ZNF500O60304 480 aaPredicted RBP1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 CTSVO60911 334 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 URODP06132 367 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 HMBSP08397 361 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 TRIM49P0CI25 452 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 TRIM49CP0CI26 452 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 DPEP1P16444 411 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 EDN2P20800 178 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 MAP2K2P36507 400 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 NR2C2P49116 596 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 CLK1P49759 484 aaKnown RBP1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 UFM1P61960 85 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 RNPS1Q15287 305 aaKnown RBP1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 GPR68Q15743 365 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 GSTA3Q16772 222 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 C2orf68Q2NKX9 166 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 TECRLQ5HYJ1 363 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 WDR38Q5JTN6 314 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 MAP3K21Q5TCX8 1036 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 ARHGAP17Q68EM7 881 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 SH2D5Q6ZV89 423 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 ANKRD18AQ8IVF6 992 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 LSM14AQ8ND56 463 aaKnown RBP1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 FGFBP3Q8TAT2 258 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 TAAR8Q969N4 342 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 PHF21AQ96BD5 680 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 TBC1D20Q96BZ9 403 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 ZNF653Q96CK0 615 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 ZNF689Q96CS4 500 aaPredicted RBP1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 KLHL29Q96CT2 875 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 ARHGEF26Q96DR7 871 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 SLC41A2Q96JW4 573 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 KLHL15Q96M94 604 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 PRKRIP1Q9H875 184 aaPredicted RBP1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 FGF22Q9HCT0 170 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 MMP25Q9NPA2 562 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 ACSS1Q9NUB1 689 aaPredicted RBP1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 ADPRHL2Q9NX46 363 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 TAGLN3Q9UI15 199 aa1.95□□□□□ -2.1
AC055872.1-201ENST00000570978 ZCWPW2A0A1B0GU75 182 aa1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 A0A1W2PPI3 338 aa1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 A6NL46 340 aa1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 VCYO14598 125 aa1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 KRT19P08727 400 aa1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 VEGFAP15692 232 aaPredicted RBP1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 MCCP23508 829 aa1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 HOXC8P31273 242 aa1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 HOXC9P31274 260 aa1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 ARCN1P48444 511 aaKnown RBP1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 CSRP3P50461 194 aa1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 SNRPD1P62314 119 aaKnown RBP1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 COG7P83436 770 aa1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 RPL24P83731 157 aaKnown RBP1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 PDE1CQ14123 709 aaPredicted RBP1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 KIR2DS3Q14952 304 aa1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 DECR1Q16698 335 aa1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 ALS2CLQ60I27 953 aa1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 TXNDC8Q6A555 127 aa1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 PACS1Q6VY07 963 aa1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 PQLC2Q6ZP29 291 aa1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 HAPLN4Q86UW8 402 aa1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 NGEFQ8N5V2 710 aa1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 PLD5Q8N7P1 536 aa1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 ANKRD52Q8NB46 1076 aa1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 MAPK1IP1LQ8NDC0 245 aa1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 PPHLN1Q8NEY8 458 aaKnown RBP1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 MRGPRDQ8TDS7 321 aa1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 UTP15Q8TED0 518 aaKnown RBP1.94□□□□□ -2.1
AC055872.1-201ENST00000570978 APBB2Q92870 758 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms