RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 IRAK2O43187 625 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 SLC28A2O43868 658 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 PGK2P07205 417 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 ENO3P13929 434 aaPredicted RBP4.22□□□□□ -1.73
NUP88-202ENST00000570937 HOXA11P31270 313 aaPredicted RBP4.22□□□□□ -1.73
NUP88-202ENST00000570937 HSPA4P34932 840 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 PPP3CCP48454 512 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 KRTAP10-9P60411 292 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 ABATP80404 500 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 RPE65Q16518 533 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 CDC37Q16543 378 aaPredicted RBP4.22□□□□□ -1.73
NUP88-202ENST00000570937 CCL14Q16627 93 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 GRAMD1BQ3KR37 738 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 KIAA1161Q6NSJ0 714 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 BLOC1S2Q6QNY1 142 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 Q6ZSV7 163 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 CHST3Q7LGC8 479 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 TMC8Q8IU68 726 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 ADHFE1Q8IWW8 467 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 MB21D2Q8IYB1 491 aaPredicted RBP4.22□□□□□ -1.73
NUP88-202ENST00000570937 TEX45Q8NA69 505 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 SETD9Q8NE22 299 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 CEP76Q8TAP6 659 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 ADAMTS15Q8TE58 950 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 CCT6BQ92526 530 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 PHF21BQ96EK2 531 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 RRP36Q96EU6 259 aaKnown RBP4.22□□□□□ -1.73
NUP88-202ENST00000570937 UBA5Q9GZZ9 404 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 RBM28Q9NW13 759 aaKnown RBP4.22□□□□□ -1.73
NUP88-202ENST00000570937 HDAC6Q9UBN7 1215 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 PLEKHB1Q9UF11 243 aaPredicted RBP4.22□□□□□ -1.73
NUP88-202ENST00000570937 FZD10Q9ULW2 581 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 MYO6Q9UM54 1294 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 DHDHQ9UQ10 334 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 CLDN16Q9Y5I7 305 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 CYP46A1Q9Y6A2 500 aa4.22□□□□□ -1.73
NUP88-202ENST00000570937 GREB1LQ9C091 1923 aaPredicted RBP4.21□□□□□ -1.74
NUP88-202ENST00000570937 KBTBD13C9JR72 458 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 STX16-NPEPL1H3BU86 382 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 GTPBP1O00178 669 aaKnown RBP4.21□□□□□ -1.74
NUP88-202ENST00000570937 DNM1LO00429 736 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 SH2B2O14492 632 aaPredicted RBP4.21□□□□□ -1.74
NUP88-202ENST00000570937 STX16O14662 325 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 ZBTB43O43298 467 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 NBNO60934 754 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 SOX30O94993 753 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 MMP3P08254 477 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 CYBAP13498 195 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 CALML3P27482 149 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 CCND3P30281 292 aaPredicted RBP4.21□□□□□ -1.74
NUP88-202ENST00000570937 DPP6P42658 865 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 SNAP25P60880 206 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 AKAP17AQ02040 695 aaKnown RBP4.21□□□□□ -1.74
NUP88-202ENST00000570937 LTBQ06643 244 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 TROAPQ12815 778 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 ACVR2BQ13705 512 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 BAATQ14032 418 aaPredicted RBP4.21□□□□□ -1.74
NUP88-202ENST00000570937 IL13RA2Q14627 380 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 USH1GQ495M9 461 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 KLHL22Q53GT1 634 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 FNBP1LQ5T0N5 605 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 NCAPH2Q6IBW4 605 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 STOX1Q6ZVD7 989 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 RUFY3Q7L099 469 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 ARMCX2Q7L311 632 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 ZNF367Q7RTV3 350 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 FAM133AQ8N9E0 248 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 USP38Q8NB14 1042 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 ELP5Q8TE02 316 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 SLC35F5Q8WV83 523 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 TBC1D20Q96BZ9 403 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 JAKMIP1Q96N16 626 aaKnown RBP4.21□□□□□ -1.74
NUP88-202ENST00000570937 IWS1Q96ST2 819 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 C11orf49Q9H6J7 331 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 JMJD4Q9H9V9 463 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 LY9Q9HBG7 655 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 NOD2Q9HC29 1040 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 TLR8Q9NR97 1041 aaKnown RBP4.21□□□□□ -1.74
NUP88-202ENST00000570937 CYP39A1Q9NYL5 469 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 IL36RNQ9UBH0 155 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 MAD2L2Q9UI95 211 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 ZHX1Q9UKY1 873 aaPredicted RBP4.21□□□□□ -1.74
NUP88-202ENST00000570937 NAP1L2Q9ULW6 460 aaPredicted RBP4.21□□□□□ -1.74
NUP88-202ENST00000570937 DNAJC16Q9Y2G8 782 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 LRP12Q9Y561 859 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 PTGDR2Q9Y5Y4 395 aa4.21□□□□□ -1.74
NUP88-202ENST00000570937 MGAMO43451 1857 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 A0A1B0GVT2 93 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 TARSL2A2RTX5 802 aaKnown RBP4.2□□□□□ -1.74
NUP88-202ENST00000570937 C4orf47A7E2U8 309 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 LDB2O43679 373 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 HBP1O60381 514 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 DUSP11O75319 330 aaKnown RBP4.2□□□□□ -1.74
NUP88-202ENST00000570937 PEX14O75381 377 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 EIF3JO75822 258 aaKnown RBP4.2□□□□□ -1.74
NUP88-202ENST00000570937 CLDN7O95471 211 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 SNAI1O95863 264 aaPredicted RBP4.2□□□□□ -1.74
NUP88-202ENST00000570937 CNPP09543 421 aaKnown RBP4.2□□□□□ -1.74
NUP88-202ENST00000570937 POLR2MP0CAP2 368 aa4.2□□□□□ -1.74
NUP88-202ENST00000570937 CASTP20810 708 aaKnown RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms