RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 MLLT6P55198 1093 aaPredicted RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 RTP1P59025 263 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 OSTNP61366 133 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 PHEXP78562 749 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 SRSF2Q01130 221 aaKnown RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 FMO1Q01740 532 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 GAD2Q05329 585 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 LIPEQ05469 1076 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 MBTD1Q05BQ5 628 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 LAMTOR4Q0VGL1 99 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 ABRQ12979 859 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 CSTF3Q12996 717 aaKnown RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 XRCC4Q13426 336 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 ALCAMQ13740 583 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 LPIN1Q14693 890 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 USP10Q14694 798 aaKnown RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 SPCS2Q15005 226 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 RAB30Q15771 203 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 TBCCQ15814 346 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 GRIK4Q16099 956 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 KCTD19Q17RG1 926 aaPredicted RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 WHAMMP3Q1A5X7 153 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 PAN2Q504Q3 1202 aaKnown RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 TMEM177Q53S58 311 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 CFAP157Q5JU67 520 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 TOR2AQ5JU69 321 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 MARCH8Q5T0T0 291 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 PEAR1Q5VY43 1037 aaPredicted RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 TDRD10Q5VZ19 366 aaKnown RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 AFMIDQ63HM1 303 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 GALNT18Q6P9A2 607 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 SUSD1Q6UWL2 747 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 ZNF852Q6ZMS4 543 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 ZNF813Q6ZN06 617 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 MACC1Q6ZN28 852 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 C15orf39Q6ZRI6 1047 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 IRF2BP2Q7Z5L9 587 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 DSG4Q86SJ6 1040 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 AKAP14Q86UN6 197 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 KBTBD6Q86V97 674 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 FJX1Q86VR8 437 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 CPNE8Q86YQ8 564 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 CAMK1DQ8IU85 385 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 KRTAP19-1Q8IUB9 90 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 CDKL3Q8IVW4 592 aaPredicted RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 ZC3H7AQ8IWR0 971 aaKnown RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 ADGRG2Q8IZP9 1017 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 ABRAQ8N0Z2 381 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 GPD1LQ8N335 351 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 METTL13Q8N6R0 699 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 LINC01465Q8N7H1 131 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 ANKFN1Q8N957 763 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 RNF149Q8NC42 400 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 BVESQ8NE79 360 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 OR5B17Q8NGF7 314 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 OR6Y1Q8NGX8 325 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 CFAP61Q8NHU2 1237 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 B4GALNT2Q8NHY0 566 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 ZNF461Q8TAF7 563 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 PIP4K2CQ8TBX8 421 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 POC1BQ8TC44 478 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 CPT1CQ8TCG5 803 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 TAS1R2Q8TE23 839 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 ZDHHC1Q8WTX9 485 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 PSPC1Q8WXF1 523 aaKnown RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 TRIB2Q92519 343 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 DPF1Q92782 380 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 FBXO32Q969P5 355 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 GAL3ST3Q96A11 431 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 SNX27Q96L92 541 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 CEP19Q96LK0 163 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 FBXL18Q96ME1 805 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 ZNF560Q96MR9 790 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 KREMEN1Q96MU8 473 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 TRNT1Q96Q11 434 aaKnown RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 ALS2CR12Q96Q35 445 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 GCNAQ96QF7 691 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 ABHD1Q96SE0 405 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 PCDHB18PQ96TA0 734 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 CYTH2Q99418 400 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 NEU1Q99519 415 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 C19orf43Q9BQ61 176 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 FAM83CQ9BQN1 747 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 FDXACB1Q9BRP7 624 aaPredicted RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 NAA11Q9BSU3 229 aaPredicted RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 MSTO1Q9BUK6 570 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 BTBD2Q9BX70 525 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 TBC1D10AQ9BXI6 508 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 ACE2Q9BYF1 805 aaPredicted RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 CELF4Q9BZC1 486 aaKnown RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 ZDHHC5Q9C0B5 715 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 POLR1EQ9GZS1 481 aaKnown RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 C12orf65Q9H3J6 166 aaKnown RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 GOLPH3Q9H4A6 298 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 APOBEC3GQ9HC16 384 aaKnown RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 MRM3Q9HC36 420 aaKnown RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 PCDH18Q9HCL0 1135 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 TREM1Q9NP99 234 aa3.56□□□□□ -1.84
SMG6-208ENST00000570874 UBE2TQ9NPD8 197 aaPredicted RBP3.56□□□□□ -1.84
SMG6-208ENST00000570874 NECTIN3Q9NQS3 549 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms