RNA–Protein interactions for RNA: ENST00000570845.5

ATP2A3-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, human

TSL 1 (best)

Gene ATP2A3, Length 604 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2A3-208	ENST00000570845	HADHA	P40939	763 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	NPY2R	P49146	381 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	SRP54	P61011	504 aa	Known RBP	11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	HNRNPK	P61978	463 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	CRADD	P78560	199 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	MRPS25	P82663	173 aa	Known RBP	11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	BNIP3	Q12983	259 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	SLC14A1	Q13336	389 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	LAMB3	Q13751	1172 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	ITGA9	Q13797	1035 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	CHRNA6	Q15825	494 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	RSPO4	Q2I0M5	234 aa	Predicted RBP	11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	ALG11	Q2TAA5	492 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	ATP13A5	Q4VNC0	1218 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	RNASEH2B	Q5TBB1	312 aa	Known RBP	11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	KCTD16	Q68DU8	428 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	MAATS1	Q7Z4T9	603 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	PCGF5	Q86SE9	256 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	GATAD2A	Q86YP4	633 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	PHYKPL	Q8IUZ5	450 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	RBFA	Q8N0V3	343 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	NAT8L	Q8N9F0	302 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	MCU	Q8NE86	351 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	STYX	Q8WUJ0	223 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	BTN2A2	Q8WVV5	523 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	OR1E3	Q8WZA6	343 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	GLYATL1	Q969I3	302 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	COX14	Q96I36	57 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	FRMD8	Q9BZ67	464 aa	Predicted RBP	11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	SLC13A1	Q9BZW2	595 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	TRIM31	Q9BZY9	425 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	IL22	Q9GZX6	179 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	TCEAL2	Q9H3H9	227 aa	Predicted RBP	11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	SUDS3	Q9H7L9	328 aa	Predicted RBP	11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	XAB2	Q9HCS7	855 aa	Known RBP	11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	FGF22	Q9HCT0	170 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	ARFGAP3	Q9NP61	516 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	MRPL40	Q9NQ50	206 aa	Known RBP	11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	NLE1	Q9NVX2	485 aa	Predicted RBP	11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	APOBEC3B	Q9UH17	382 aa	Known RBP	11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	KLF15	Q9UIH9	416 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	APPL1	Q9UKG1	709 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	CNOT6	Q9ULM6	557 aa	Known RBP	11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	TMEM98	Q9Y2Y6	226 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	TCAF1	Q9Y4C2	921 aa		11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	OAS3	Q9Y6K5	1087 aa	Known RBP	11.48	□□□□□ -0.57
ATP2A3-208	ENST00000570845	SNRNP200	O75643	2136 aa	Known RBP	11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	KIF26B	Q2KJY2	2108 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	FAM187A	A6NFU0	413 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	EFCAB8	A8MWE9	144 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	TNFRSF10C	O14798	259 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	GPR39	O43194	453 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	RAD51C	O43502	376 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	PCDHGA12	O60330	932 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	UGT1A9	O60656	530 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	AVIL	O75366	819 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	PIAS2	O75928	621 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	SRP72	O76094	671 aa	Known RBP	11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	SLC25A14	O95258	325 aa	Predicted RBP	11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	PRAMEF1	O95521	474 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	TNF	P01375	233 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	CEACAM5	P06731	702 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	CD59	P13987	128 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	UGT1A6	P19224	532 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	UGT1A1	P22309	533 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	UGT1A4	P22310	534 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	DGKA	P23743	735 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	IVD	P26440	423 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	UGT1A3	P35503	534 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	UGT1A5	P35504	534 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	POLD2	P49005	469 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	BLK	P51451	505 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	HK3	P52790	923 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	SKIDA1	Q1XH10	827 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	PCID2	Q5JVF3	399 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	TSTD2	Q5T7W7	516 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	CAND1	Q86VP6	1230 aa	Known RBP	11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	HOOK3	Q86VS8	718 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	ZNF548	Q8NEK5	533 aa	Predicted RBP	11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	GDAP1	Q8TB36	358 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	DTX3L	Q8TDB6	740 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	SAP25	Q8TEE9	199 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	PTCD2	Q8WV60	388 aa	Known RBP	11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	SNF8	Q96H20	258 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	SERPINB12	Q96P63	405 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	VPS35	Q96QK1	796 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	C19orf43	Q9BQ61	176 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	UGT1A7	Q9HAW7	530 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	UGT1A10	Q9HAW8	530 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	UGT1A8	Q9HAW9	530 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	CYP4F12	Q9HCS2	524 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	SYBU	Q9NX95	663 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	PCDHGB2	Q9Y5G2	931 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	DGKB	Q9Y6T7	804 aa		11.47	□□□□□ -0.57
ATP2A3-208	ENST00000570845	SLC30A4	O14863	429 aa		11.46	□□□□□ -0.57
ATP2A3-208	ENST00000570845	FLRT2	O43155	660 aa		11.46	□□□□□ -0.57
ATP2A3-208	ENST00000570845	AQP9	O43315	295 aa		11.46	□□□□□ -0.57
ATP2A3-208	ENST00000570845	IVL	P07476	585 aa		11.46	□□□□□ -0.57
ATP2A3-208	ENST00000570845	MLN	P12872	115 aa		11.46	□□□□□ -0.57
ATP2A3-208	ENST00000570845	CTSE	P14091	401 aa		11.46	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms