RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 STN1Q9H668 368 aaKnown RBP10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 SIX2Q9NPC8 291 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 CPNE7Q9UBL6 633 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 CNOT8Q9UFF9 292 aaKnown RBP10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 DNAJC12Q9UKB3 198 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 PRKAB1Q9Y478 270 aa10.33□□□□□ -0.76
CTDNEP1-202ENST00000570380 TTC24A2A3L6 582 aaPredicted RBP10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 A6NL46 340 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 C2CD4BA6NLJ0 364 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 PPP1R3GB7ZBB8 358 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 ZNF185O15231 689 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 TOX3O15405 576 aaPredicted RBP10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 KIF1CO43896 1103 aaKnown RBP10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 DNAJC6O75061 913 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 PALMO75781 387 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 SMC2O95347 1197 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 CYP11B1P15538 503 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 TYRP1P17643 537 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 LPOP22079 712 aaPredicted RBP10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 HNRNPH3P31942 346 aaKnown RBP10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 PTPN9P43378 593 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 SCNN1BP51168 640 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 STX17P56962 302 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 RPS15P62841 145 aaKnown RBP10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 DPTQ07507 201 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 NSUN2Q08J23 767 aaKnown RBP eCLIP10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 CRB2Q5IJ48 1285 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 TAF3Q5VWG9 929 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 SMYD5Q6GMV2 418 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 ADAMTSL4Q6UY14 1074 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 GBP6Q6ZN66 633 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 TECPR1Q7Z6L1 1165 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 SLFN11Q7Z7L1 901 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 TSPAN33Q86UF1 283 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 PPP1R3BQ86XI6 285 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 IQCKQ8N0W5 287 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 FMR1NBQ8N0W7 255 aaPredicted RBP10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 ADAMTS17Q8TE56 1095 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 FAM172AQ8WUF8 416 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 SPOCK2Q92563 424 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 LURAP1Q96LR2 239 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 SMAD5Q99717 465 aaKnown RBP10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 BARD1Q99728 777 aaKnown RBP10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 SLC39A8Q9C0K1 460 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 ABCG8Q9H221 673 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 ZNHIT2Q9UHR6 403 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 CD84Q9UIB8 345 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 ITGB1BP2Q9UKP3 347 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 CTNND2Q9UQB3 1225 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 KCNK6Q9Y257 313 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 NTNG1Q9Y2I2 539 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 SLC30A1Q9Y6M5 507 aa10.32□□□□□ -0.76
CTDNEP1-202ENST00000570380 A0A0U1RQS6 177 aa10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 SSU72P8A0A1W2PR75 194 aa10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 NPIPB15A6NHN6 443 aaPredicted RBP10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 LILRA5A6NI73 299 aa10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 PRSS44E7EML9 344 aa10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 PSMD11O00231 422 aa10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 LRRTM2O43300 516 aa10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 HTRA2O43464 458 aaPredicted RBP10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 CREB3O43889 395 aa10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 SNX2O60749 519 aa10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 RASSF9O75901 435 aa10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 TMEM63AO94886 807 aa10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 F3P13726 295 aa10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 PAPOLAP51003 745 aaKnown RBP10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 BPIFB4P59827 614 aa10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 NOMO3P69849 1222 aa10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 EXOC3L4Q17RC7 722 aa10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 PWWP2BQ6NUJ5 590 aa10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 CHST15Q7LFX5 561 aaPredicted RBP10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 LZTR1Q8N653 840 aa10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 KLHL6Q8WZ60 621 aa10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 COX14Q96I36 57 aa10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 CELF6Q96J87 481 aaKnown RBP10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 AGAP2Q99490 1192 aa10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 HERPUD2Q9BSE4 406 aa10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 CINPQ9BW66 212 aaPredicted RBP10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 RUBCNLQ9H714 662 aa10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 CATSPERBQ9H7T0 1116 aa10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 GPR83Q9NYM4 423 aa10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 MAN1B1Q9UKM7 699 aa10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 FARSAQ9Y285 508 aaKnown RBP10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 PCDHGC4Q9Y5F7 938 aa10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 SEC16AO15027 2179 aa10.31□□□□□ -0.76
CTDNEP1-202ENST00000570380 KIR2DS5A0A0G2JLQ3 304 aa10.3□□□□□ -0.76
CTDNEP1-202ENST00000570380 A0A0G2JNG1 304 aa10.3□□□□□ -0.76
CTDNEP1-202ENST00000570380 BICDL2A1A5D9 508 aa10.3□□□□□ -0.76
CTDNEP1-202ENST00000570380 HEATR9A2RTY3 570 aa10.3□□□□□ -0.76
CTDNEP1-202ENST00000570380 KIR2DS3K7RE56 304 aa10.3□□□□□ -0.76
CTDNEP1-202ENST00000570380 ZG16O60844 167 aa10.3□□□□□ -0.76
CTDNEP1-202ENST00000570380 UBXN7O94888 489 aa10.3□□□□□ -0.76
CTDNEP1-202ENST00000570380 ASMTLO95671 621 aa10.3□□□□□ -0.76
CTDNEP1-202ENST00000570380 LSM8O95777 96 aaKnown RBP10.3□□□□□ -0.76
CTDNEP1-202ENST00000570380 ATP1A1P05023 1023 aaKnown RBP10.3□□□□□ -0.76
CTDNEP1-202ENST00000570380 CYP2A6P11509 494 aaPredicted RBP10.3□□□□□ -0.76
CTDNEP1-202ENST00000570380 ACP5P13686 325 aa10.3□□□□□ -0.76
CTDNEP1-202ENST00000570380 PPP1R2P41236 205 aa10.3□□□□□ -0.76
CTDNEP1-202ENST00000570380 AP1S1P61966 158 aa10.3□□□□□ -0.76
CTDNEP1-202ENST00000570380 UBE2IP63279 158 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms