RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 IL17CQ9P0M4 197 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 ZNHIT2Q9UHR6 403 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 APOBEC2Q9Y235 224 aaKnown RBP12.72□□□□□ -0.37
CDT1-203ENST00000569140 KCTD3Q9Y597 815 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 WDR87Q6ZQQ6 2873 aa12.72□□□□□ -0.37
CDT1-203ENST00000569140 SCN8AQ9UQD0 1980 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 LRP4O75096 1905 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 B4DGG1 531 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 CCL22O00626 93 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 GPR39O43194 453 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 MTX2O75431 263 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 FTH1P19P0C7X4 201 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 MYF5P13349 255 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 AKT1P31749 480 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 PDE1BQ01064 536 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 CDH17Q12864 832 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 ILF3Q12906 894 aaKnown RBP eCLIP12.71□□□□□ -0.37
CDT1-203ENST00000569140 GTF2H3Q13889 308 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 CHRNA6Q15825 494 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 PAPD7Q5XG87 772 aaKnown RBP12.71□□□□□ -0.37
CDT1-203ENST00000569140 DENND5AQ6IQ26 1287 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 CRTC3Q6UUV7 619 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 ERMP1Q7Z2K6 904 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 NLRP8Q86W28 1048 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 KLHL7Q8IXQ5 586 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 PNPLA1Q8N8W4 532 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 OR13C4Q8NGS5 318 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 BAHD1Q8TBE0 780 aaPredicted RBP12.71□□□□□ -0.37
CDT1-203ENST00000569140 PTCD2Q8WV60 388 aaKnown RBP12.71□□□□□ -0.37
CDT1-203ENST00000569140 GLMNQ92990 594 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 GLYATL1Q969I3 302 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 C16orf45Q96MC5 204 aaPredicted RBP12.71□□□□□ -0.37
CDT1-203ENST00000569140 OR2M4Q96R27 311 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 CLPBQ9H078 707 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 DDX47Q9H0S4 455 aaKnown RBP12.71□□□□□ -0.37
CDT1-203ENST00000569140 OR2AG1Q9H205 316 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 GULP1Q9UBP9 304 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 FKBPLQ9UIM3 349 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 GPR34Q9UPC5 381 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 SLC17A4Q9Y2C5 497 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 PRKAB1Q9Y478 270 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 OAS3Q9Y6K5 1087 aaKnown RBP12.71□□□□□ -0.37
CDT1-203ENST00000569140 CSNK1G3Q9Y6M4 447 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 DGKBQ9Y6T7 804 aa12.71□□□□□ -0.37
CDT1-203ENST00000569140 ASCC3Q8N3C0 2202 aaKnown RBP12.7□□□□□ -0.38
CDT1-203ENST00000569140 YY2O15391 372 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 PPFIA2O75334 1257 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 PRAMEF1O95521 474 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 ECEL1O95672 775 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 IVLP07476 585 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 GRIA1P42261 906 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 FNTAP49354 379 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 SESN2P58004 480 aaPredicted RBP12.7□□□□□ -0.38
CDT1-203ENST00000569140 ITGA9Q13797 1035 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 CYP1B1Q16678 543 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 PLA2G4EQ3MJ16 856 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 ATP13A5Q4VNC0 1218 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 CCDC38Q502W7 563 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 CERCAMQ5T4B2 595 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 PDPK2PQ6A1A2 396 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 ZCCHC8Q6NZY4 707 aaKnown RBP12.7□□□□□ -0.38
CDT1-203ENST00000569140 SLC30A9Q6PML9 568 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 CHST15Q7LFX5 561 aaPredicted RBP12.7□□□□□ -0.38
CDT1-203ENST00000569140 KLHDC8BQ8IXV7 354 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 CCL4L1Q8NHW4 92 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 COX14Q96I36 57 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 DNAJC1Q96KC8 554 aaKnown RBP12.7□□□□□ -0.38
CDT1-203ENST00000569140 APOLD1Q96LR9 279 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 TBATAQ96M53 351 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 TTC25Q96NG3 672 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 GSDMCQ9BYG8 508 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 DPEP2Q9H4A9 486 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 SYNDIG1Q9H7V2 258 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 ARNT2Q9HBZ2 717 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 IL26Q9NPH9 171 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 KCND1Q9NSA2 647 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 NFKBIL1Q9UBC1 381 aaPredicted RBP12.7□□□□□ -0.38
CDT1-203ENST00000569140 CRLS1Q9UJA2 301 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 CNOT6Q9ULM6 557 aaKnown RBP12.7□□□□□ -0.38
CDT1-203ENST00000569140 MYLKQ15746 1914 aa12.7□□□□□ -0.38
CDT1-203ENST00000569140 MED19A0JLT2 244 aaPredicted RBP12.69□□□□□ -0.38
CDT1-203ENST00000569140 CPED1A4D0V7 1026 aa12.69□□□□□ -0.38
CDT1-203ENST00000569140 LMO7DNF2Z398 122 aa12.69□□□□□ -0.38
CDT1-203ENST00000569140 UGT1A9O60656 530 aa12.69□□□□□ -0.38
CDT1-203ENST00000569140 RFPL3O75679 317 aa12.69□□□□□ -0.38
CDT1-203ENST00000569140 SUN1O94901 812 aa12.69□□□□□ -0.38
CDT1-203ENST00000569140 ACP5P13686 325 aa12.69□□□□□ -0.38
CDT1-203ENST00000569140 CKMT2P17540 419 aa12.69□□□□□ -0.38
CDT1-203ENST00000569140 UGT1A6P19224 532 aa12.69□□□□□ -0.38
CDT1-203ENST00000569140 ITGALP20701 1170 aa12.69□□□□□ -0.38
CDT1-203ENST00000569140 UGT1A1P22309 533 aa12.69□□□□□ -0.38
CDT1-203ENST00000569140 UGT1A4P22310 534 aa12.69□□□□□ -0.38
CDT1-203ENST00000569140 AK4P27144 223 aaPredicted RBP12.69□□□□□ -0.38
CDT1-203ENST00000569140 UGT1A3P35503 534 aa12.69□□□□□ -0.38
CDT1-203ENST00000569140 UGT1A5P35504 534 aa12.69□□□□□ -0.38
CDT1-203ENST00000569140 ADCY8P40145 1251 aa12.69□□□□□ -0.38
CDT1-203ENST00000569140 HADHAP40939 763 aa12.69□□□□□ -0.38
CDT1-203ENST00000569140 ZNF140P52738 457 aaPredicted RBP12.69□□□□□ -0.38
CDT1-203ENST00000569140 ETF1P62495 437 aaKnown RBP12.69□□□□□ -0.38
CDT1-203ENST00000569140 BIRC2Q13490 618 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms