RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 IGF2-ASQ6U949 168 aa20.13■□□□□ 0.81
CLK3-225ENST00000569063 MARK2Q7KZI7 788 aaKnown RBP20.13■□□□□ 0.81
CLK3-225ENST00000569063 SPRED1Q7Z699 444 aa20.13■□□□□ 0.81
CLK3-225ENST00000569063 GALNT13Q8IUC8 556 aa20.13■□□□□ 0.81
CLK3-225ENST00000569063 SYCE1Q8N0S2 351 aa20.13■□□□□ 0.81
CLK3-225ENST00000569063 OXNAD1Q96HP4 312 aaPredicted RBP20.13■□□□□ 0.81
CLK3-225ENST00000569063 ZNF578Q96N58 590 aaPredicted RBP20.13■□□□□ 0.81
CLK3-225ENST00000569063 DESI2Q9BSY9 194 aa20.13■□□□□ 0.81
CLK3-225ENST00000569063 ZSCAN5AQ9BUG6 496 aa20.13■□□□□ 0.81
CLK3-225ENST00000569063 SYNDIG1Q9H7V2 258 aa20.13■□□□□ 0.81
CLK3-225ENST00000569063 TRIM10Q9UDY6 481 aa20.13■□□□□ 0.81
CLK3-225ENST00000569063 AMFRQ9UKV5 643 aa20.13■□□□□ 0.81
CLK3-225ENST00000569063 SATB2Q9UPW6 733 aa20.13■□□□□ 0.81
CLK3-225ENST00000569063 PLEKHM1Q9Y4G2 1056 aa20.13■□□□□ 0.81
CLK3-225ENST00000569063 SPO11Q9Y5K1 396 aa20.13■□□□□ 0.81
CLK3-225ENST00000569063 CELSR3Q9NYQ7 3312 aa20.12■□□□□ 0.81
CLK3-225ENST00000569063 A0A1W2PNU3 283 aaPredicted RBP20.12■□□□□ 0.81
CLK3-225ENST00000569063 MACROD2A1Z1Q3 448 aa20.12■□□□□ 0.81
CLK3-225ENST00000569063 D6RAR5 112 aa20.12■□□□□ 0.81
CLK3-225ENST00000569063 TMX2-CTNND1H3BSU7 103 aa20.12■□□□□ 0.81
CLK3-225ENST00000569063 AURKAO14965 403 aa20.12■□□□□ 0.81
CLK3-225ENST00000569063 TJP3O95049 919 aa20.12■□□□□ 0.81
CLK3-225ENST00000569063 ECEL1O95672 775 aa20.12■□□□□ 0.81
CLK3-225ENST00000569063 HMGCLP35914 325 aa20.12■□□□□ 0.81
CLK3-225ENST00000569063 ACTR1BP42025 376 aa20.12■□□□□ 0.81
CLK3-225ENST00000569063 ACTR1AP61163 376 aa20.12■□□□□ 0.81
CLK3-225ENST00000569063 NR1D2Q14995 579 aa20.12■□□□□ 0.81
CLK3-225ENST00000569063 SIRPB2Q5JXA9 342 aa20.12■□□□□ 0.81
CLK3-225ENST00000569063 PEX26Q7Z412 305 aa20.12■□□□□ 0.81
CLK3-225ENST00000569063 ZNF438Q7Z4V0 828 aa20.12■□□□□ 0.81
CLK3-225ENST00000569063 NAGSQ8N159 534 aa20.12■□□□□ 0.81
CLK3-225ENST00000569063 ARL14Q8N4G2 192 aa20.12■□□□□ 0.81
CLK3-225ENST00000569063 TRAM1L1Q8N609 369 aa20.12■□□□□ 0.81
CLK3-225ENST00000569063 Q8N9G6 341 aaPredicted RBP20.12■□□□□ 0.81
CLK3-225ENST00000569063 HNRNPLLQ8WVV9 542 aaKnown RBP20.12■□□□□ 0.81
CLK3-225ENST00000569063 FERMT1Q9BQL6 677 aa20.12■□□□□ 0.81
CLK3-225ENST00000569063 SPATA16Q9BXB7 569 aa20.12■□□□□ 0.81
CLK3-225ENST00000569063 TRABDQ9H4I3 376 aa20.12■□□□□ 0.81
CLK3-225ENST00000569063 C10orf88Q9H8K7 445 aa20.12■□□□□ 0.81
CLK3-225ENST00000569063 RSPH14Q9UHP6 348 aa20.12■□□□□ 0.81
CLK3-225ENST00000569063 ZNHIT2Q9UHR6 403 aa20.12■□□□□ 0.81
CLK3-225ENST00000569063 PCDHGA8Q9Y5G5 932 aa20.12■□□□□ 0.81
CLK3-225ENST00000569063 A0A0U1RQJ8 604 aa20.11■□□□□ 0.81
CLK3-225ENST00000569063 MIF4GDA9UHW6 222 aaKnown RBP20.11■□□□□ 0.81
CLK3-225ENST00000569063 BPIP17213 487 aa20.11■□□□□ 0.81
CLK3-225ENST00000569063 TNNT3P45378 269 aaPredicted RBP20.11■□□□□ 0.81
CLK3-225ENST00000569063 MAZP56270 477 aaKnown RBP20.11■□□□□ 0.81
CLK3-225ENST00000569063 EIF3EP60228 445 aaKnown RBP20.11■□□□□ 0.81
CLK3-225ENST00000569063 ERVPABLB-1P60509 514 aa20.11■□□□□ 0.81
CLK3-225ENST00000569063 B4GALNT1Q00973 533 aa20.11■□□□□ 0.81
CLK3-225ENST00000569063 SLC1A5Q15758 541 aa20.11■□□□□ 0.81
CLK3-225ENST00000569063 C3orf38Q5JPI3 329 aa20.11■□□□□ 0.81
CLK3-225ENST00000569063 ALS2CLQ60I27 953 aa20.11■□□□□ 0.81
CLK3-225ENST00000569063 AADACL2Q6P093 401 aa20.11■□□□□ 0.81
CLK3-225ENST00000569063 C19orf48Q6RUI8 117 aa20.11■□□□□ 0.81
CLK3-225ENST00000569063 CDKL3Q8IVW4 592 aaPredicted RBP20.11■□□□□ 0.81
CLK3-225ENST00000569063 WDR36Q8NI36 951 aaKnown RBP20.11■□□□□ 0.81
CLK3-225ENST00000569063 LIN37Q96GY3 246 aaPredicted RBP20.11■□□□□ 0.81
CLK3-225ENST00000569063 PRR11Q96HE9 360 aaPredicted RBP20.11■□□□□ 0.81
CLK3-225ENST00000569063 DCBLD2Q96PD2 775 aa20.11■□□□□ 0.81
CLK3-225ENST00000569063 PLEKHG4BQ96PX9 1271 aa20.11■□□□□ 0.81
CLK3-225ENST00000569063 GBA3Q9H227 469 aa20.11■□□□□ 0.81
CLK3-225ENST00000569063 CARD9Q9H257 536 aa20.11■□□□□ 0.81
CLK3-225ENST00000569063 TRIM39Q9HCM9 518 aa20.11■□□□□ 0.81
CLK3-225ENST00000569063 ASCL3Q9NQ33 180 aa20.11■□□□□ 0.81
CLK3-225ENST00000569063 LHX6Q9UPM6 363 aa20.11■□□□□ 0.81
CLK3-225ENST00000569063 PCYT1BQ9Y5K3 369 aaPredicted RBP20.11■□□□□ 0.81
CLK3-225ENST00000569063 LAMA5O15230 3695 aa20.11■□□□□ 0.81
CLK3-225ENST00000569063 RHPN2P1A8MT19 583 aa20.1■□□□□ 0.81
CLK3-225ENST00000569063 GOLGA6L6A8MZA4 724 aa20.1■□□□□ 0.81
CLK3-225ENST00000569063 GPR89AB7ZAQ6 455 aa20.1■□□□□ 0.81
CLK3-225ENST00000569063 RRP8O43159 456 aaKnown RBP20.1■□□□□ 0.81
CLK3-225ENST00000569063 NUAK1O60285 661 aa20.1■□□□□ 0.81
CLK3-225ENST00000569063 SLC25A14O95258 325 aaPredicted RBP20.1■□□□□ 0.81
CLK3-225ENST00000569063 SLC4A1P02730 911 aa20.1■□□□□ 0.81
CLK3-225ENST00000569063 GPR89BP0CG08 455 aa20.1■□□□□ 0.81
CLK3-225ENST00000569063 RBP3P10745 1247 aa20.1■□□□□ 0.81
CLK3-225ENST00000569063 HLA-DPA1P20036 260 aa20.1■□□□□ 0.81
CLK3-225ENST00000569063 CCKBRP32239 447 aa20.1■□□□□ 0.81
CLK3-225ENST00000569063 CHRNA4P43681 627 aa20.1■□□□□ 0.81
CLK3-225ENST00000569063 COL28A1Q2UY09 1125 aa20.1■□□□□ 0.81
CLK3-225ENST00000569063 ZNF569Q5MCW4 686 aa20.1■□□□□ 0.81
CLK3-225ENST00000569063 ITPRIPL1Q6GPH6 555 aa20.1■□□□□ 0.81
CLK3-225ENST00000569063 B3GNT8Q7Z7M8 397 aa20.1■□□□□ 0.81
CLK3-225ENST00000569063 RNF10Q8N5U6 811 aaKnown RBP20.1■□□□□ 0.81
CLK3-225ENST00000569063 UBL4BQ8N7F7 174 aa20.1■□□□□ 0.81
CLK3-225ENST00000569063 IPMKQ8NFU5 416 aa20.1■□□□□ 0.81
CLK3-225ENST00000569063 GLYATL1Q969I3 302 aa20.1■□□□□ 0.81
CLK3-225ENST00000569063 TMEM74Q96NL1 305 aa20.1■□□□□ 0.81
CLK3-225ENST00000569063 SLC46A1Q96NT5 459 aa20.1■□□□□ 0.81
CLK3-225ENST00000569063 HACD3Q9P035 362 aa20.1■□□□□ 0.81
CLK3-225ENST00000569063 ATXN10Q9UBB4 475 aa20.1■□□□□ 0.81
CLK3-225ENST00000569063 APC2O95996 2303 aa20.1■□□□□ 0.81
CLK3-225ENST00000569063 ANKRD11Q6UB99 2663 aaPredicted RBP20.09■□□□□ 0.81
CLK3-225ENST00000569063 CCDC187A0A096LP49 1063 aa20.09■□□□□ 0.81
CLK3-225ENST00000569063 F5H423 210 aaPredicted RBP20.09■□□□□ 0.81
CLK3-225ENST00000569063 ZW10O43264 779 aa20.09■□□□□ 0.81
CLK3-225ENST00000569063 B4GAT1O43505 415 aa20.09■□□□□ 0.81
CLK3-225ENST00000569063 ZNF189O75820 626 aaPredicted RBP20.09■□□□□ 0.81
CLK3-225ENST00000569063 ANXA9O76027 345 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms