RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 GFM1Q96RP9 751 aaKnown RBP29.16■■■□□ 2.26
RAB40C-211ENST00000568586 RMI1Q9H9A7 625 aa29.16■■■□□ 2.26
RAB40C-211ENST00000568586 ASCL3Q9NQ33 180 aa29.16■■■□□ 2.26
RAB40C-211ENST00000568586 UBP1Q9NZI7 540 aa29.16■■■□□ 2.26
RAB40C-211ENST00000568586 KLHL8Q9P2G9 620 aaPredicted RBP29.16■■■□□ 2.26
RAB40C-211ENST00000568586 SHOC2Q9UQ13 582 aa29.16■■■□□ 2.26
RAB40C-211ENST00000568586 RPLP0P05388 317 aaKnown RBP29.15■■■□□ 2.26
RAB40C-211ENST00000568586 PIRTP0C851 137 aa29.15■■■□□ 2.26
RAB40C-211ENST00000568586 B4GALNT1Q00973 533 aa29.15■■■□□ 2.26
RAB40C-211ENST00000568586 SLC30A9Q6PML9 568 aa29.15■■■□□ 2.26
RAB40C-211ENST00000568586 KIAA1328Q86T90 577 aa29.15■■■□□ 2.26
RAB40C-211ENST00000568586 GALNT13Q8IUC8 556 aa29.15■■■□□ 2.26
RAB40C-211ENST00000568586 ACTL9Q8TC94 416 aa29.15■■■□□ 2.26
RAB40C-211ENST00000568586 LIN37Q96GY3 246 aaPredicted RBP29.15■■■□□ 2.26
RAB40C-211ENST00000568586 PRR11Q96HE9 360 aaPredicted RBP29.15■■■□□ 2.26
RAB40C-211ENST00000568586 ZSCAN5AQ9BUG6 496 aa29.15■■■□□ 2.26
RAB40C-211ENST00000568586 TRABDQ9H4I3 376 aa29.15■■■□□ 2.26
RAB40C-211ENST00000568586 SUDS3Q9H7L9 328 aaPredicted RBP29.15■■■□□ 2.26
RAB40C-211ENST00000568586 PLEKHM1Q9Y4G2 1056 aa29.15■■■□□ 2.26
RAB40C-211ENST00000568586 SPO11Q9Y5K1 396 aa29.15■■■□□ 2.26
RAB40C-211ENST00000568586 ADAMTS20P59510 1910 aa29.15■■■□□ 2.26
RAB40C-211ENST00000568586 TMX2-CTNND1H3BSU7 103 aa29.14■■■□□ 2.26
RAB40C-211ENST00000568586 PYGMP11217 842 aa29.14■■■□□ 2.26
RAB40C-211ENST00000568586 KIF5AQ12840 1032 aa29.14■■■□□ 2.26
RAB40C-211ENST00000568586 MPP3Q13368 585 aa29.14■■■□□ 2.26
RAB40C-211ENST00000568586 NAGSQ8N159 534 aa29.14■■■□□ 2.26
RAB40C-211ENST00000568586 ARL14Q8N4G2 192 aa29.14■■■□□ 2.26
RAB40C-211ENST00000568586 TRAM1L1Q8N609 369 aa29.14■■■□□ 2.26
RAB40C-211ENST00000568586 GPR63Q9BZJ6 419 aa29.14■■■□□ 2.26
RAB40C-211ENST00000568586 LHX6Q9UPM6 363 aa29.14■■■□□ 2.26
RAB40C-211ENST00000568586 SATB2Q9UPW6 733 aa29.14■■■□□ 2.26
RAB40C-211ENST00000568586 PCYT1BQ9Y5K3 369 aaPredicted RBP29.14■■■□□ 2.26
RAB40C-211ENST00000568586 UNC13CQ8NB66 2214 aa29.14■■■□□ 2.26
RAB40C-211ENST00000568586 ECEL1O95672 775 aa29.13■■■□□ 2.25
RAB40C-211ENST00000568586 ATP1A1P05023 1023 aaKnown RBP29.13■■■□□ 2.25
RAB40C-211ENST00000568586 RBL1P28749 1068 aa29.13■■■□□ 2.25
RAB40C-211ENST00000568586 CCKBRP32239 447 aa29.13■■■□□ 2.25
RAB40C-211ENST00000568586 HMGCLP35914 325 aa29.13■■■□□ 2.25
RAB40C-211ENST00000568586 MLLT3P42568 568 aaPredicted RBP29.13■■■□□ 2.25
RAB40C-211ENST00000568586 OTUD4Q01804 1114 aaKnown RBP29.13■■■□□ 2.25
RAB40C-211ENST00000568586 WDR36Q8NI36 951 aaKnown RBP29.13■■■□□ 2.25
RAB40C-211ENST00000568586 DTX3LQ8TDB6 740 aa29.13■■■□□ 2.25
RAB40C-211ENST00000568586 SLC46A1Q96NT5 459 aa29.13■■■□□ 2.25
RAB40C-211ENST00000568586 CARD9Q9H257 536 aa29.13■■■□□ 2.25
RAB40C-211ENST00000568586 CCDC187A0A096LP49 1063 aa29.12■■■□□ 2.25
RAB40C-211ENST00000568586 AURKAO14965 403 aa29.12■■■□□ 2.25
RAB40C-211ENST00000568586 ASMTLO95671 621 aa29.12■■■□□ 2.25
RAB40C-211ENST00000568586 BPIP17213 487 aa29.12■■■□□ 2.25
RAB40C-211ENST00000568586 CETN2P41208 172 aa29.12■■■□□ 2.25
RAB40C-211ENST00000568586 ACTR1BP42025 376 aa29.12■■■□□ 2.25
RAB40C-211ENST00000568586 MAZP56270 477 aaKnown RBP29.12■■■□□ 2.25
RAB40C-211ENST00000568586 ACTR1AP61163 376 aa29.12■■■□□ 2.25
RAB40C-211ENST00000568586 ZFP36L1Q07352 338 aaKnown RBP29.12■■■□□ 2.25
RAB40C-211ENST00000568586 SIRPB2Q5JXA9 342 aa29.12■■■□□ 2.25
RAB40C-211ENST00000568586 C19orf48Q6RUI8 117 aa29.12■■■□□ 2.25
RAB40C-211ENST00000568586 MARK2Q7KZI7 788 aaKnown RBP29.12■■■□□ 2.25
RAB40C-211ENST00000568586 B3GNT8Q7Z7M8 397 aa29.12■■■□□ 2.25
RAB40C-211ENST00000568586 SYCE1Q8N0S2 351 aa29.12■■■□□ 2.25
RAB40C-211ENST00000568586 HNRNPLLQ8WVV9 542 aaKnown RBP29.12■■■□□ 2.25
RAB40C-211ENST00000568586 PLEKHG4BQ96PX9 1271 aa29.12■■■□□ 2.25
RAB40C-211ENST00000568586 SPATA16Q9BXB7 569 aa29.12■■■□□ 2.25
RAB40C-211ENST00000568586 AMFRQ9UKV5 643 aa29.12■■■□□ 2.25
RAB40C-211ENST00000568586 ADGRG1Q9Y653 693 aa29.12■■■□□ 2.25
RAB40C-211ENST00000568586 MIF4GDA9UHW6 222 aaKnown RBP29.11■■■□□ 2.25
RAB40C-211ENST00000568586 GPR89AB7ZAQ6 455 aa29.11■■■□□ 2.25
RAB40C-211ENST00000568586 H7C0C1 242 aa29.11■■■□□ 2.25
RAB40C-211ENST00000568586 B4GAT1O43505 415 aa29.11■■■□□ 2.25
RAB40C-211ENST00000568586 NUAK1O60285 661 aa29.11■■■□□ 2.25
RAB40C-211ENST00000568586 TJP3O95049 919 aa29.11■■■□□ 2.25
RAB40C-211ENST00000568586 GPR89BP0CG08 455 aa29.11■■■□□ 2.25
RAB40C-211ENST00000568586 HLA-DPA1P20036 260 aa29.11■■■□□ 2.25
RAB40C-211ENST00000568586 GPR3P46089 330 aa29.11■■■□□ 2.25
RAB40C-211ENST00000568586 ATP5OP48047 213 aa29.11■■■□□ 2.25
RAB40C-211ENST00000568586 EIF3IQ13347 325 aaKnown RBP29.11■■■□□ 2.25
RAB40C-211ENST00000568586 SLC1A5Q15758 541 aa29.11■■■□□ 2.25
RAB40C-211ENST00000568586 CLPPQ16740 277 aaPredicted RBP29.11■■■□□ 2.25
RAB40C-211ENST00000568586 COL28A1Q2UY09 1125 aa29.11■■■□□ 2.25
RAB40C-211ENST00000568586 CCDC181Q5TID7 509 aa29.11■■■□□ 2.25
RAB40C-211ENST00000568586 TTC30BQ8N4P2 665 aa29.11■■■□□ 2.25
RAB40C-211ENST00000568586 Q8N9G6 341 aaPredicted RBP29.11■■■□□ 2.25
RAB40C-211ENST00000568586 SPC24Q8NBT2 197 aa29.11■■■□□ 2.25
RAB40C-211ENST00000568586 TMEM74Q96NL1 305 aa29.11■■■□□ 2.25
RAB40C-211ENST00000568586 GORASP1Q9BQQ3 440 aa29.11■■■□□ 2.25
RAB40C-211ENST00000568586 DESI2Q9BSY9 194 aa29.11■■■□□ 2.25
RAB40C-211ENST00000568586 GBA3Q9H227 469 aa29.11■■■□□ 2.25
RAB40C-211ENST00000568586 TRIM39Q9HCM9 518 aa29.11■■■□□ 2.25
RAB40C-211ENST00000568586 HACD3Q9P035 362 aa29.11■■■□□ 2.25
RAB40C-211ENST00000568586 TRIM10Q9UDY6 481 aa29.11■■■□□ 2.25
RAB40C-211ENST00000568586 ZNHIT2Q9UHR6 403 aa29.11■■■□□ 2.25
RAB40C-211ENST00000568586 IGSF10Q6WRI0 2623 aa29.11■■■□□ 2.25
RAB40C-211ENST00000568586 A0A0U1RQJ8 604 aa29.1■■■□□ 2.25
RAB40C-211ENST00000568586 RRP8O43159 456 aaKnown RBP29.1■■■□□ 2.25
RAB40C-211ENST00000568586 C3orf38Q5JPI3 329 aa29.1■■■□□ 2.25
RAB40C-211ENST00000568586 ZNF569Q5MCW4 686 aa29.1■■■□□ 2.25
RAB40C-211ENST00000568586 PEX26Q7Z412 305 aa29.1■■■□□ 2.25
RAB40C-211ENST00000568586 CDKL3Q8IVW4 592 aaPredicted RBP29.1■■■□□ 2.25
RAB40C-211ENST00000568586 PATE1Q8WXA2 126 aa29.1■■■□□ 2.25
RAB40C-211ENST00000568586 GLYATL1Q969I3 302 aa29.1■■■□□ 2.25
RAB40C-211ENST00000568586 FERMT1Q9BQL6 677 aa29.1■■■□□ 2.25
RAB40C-211ENST00000568586 C10orf88Q9H8K7 445 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms