RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 FTCDO95954 541 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 STIP1P31948 543 aaKnown RBP8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 ADCY8P40145 1251 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 ATP5OP48047 213 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 POLD2P49005 469 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 GEMP55040 296 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 CTBSQ01459 385 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 PEX6Q13608 980 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 OASLQ15646 514 aaKnown RBP8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 CLPPQ16740 277 aaPredicted RBP8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 PARP6Q2NL67 630 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 ITPRIPL1Q6GPH6 555 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 CCDC70Q6NSX1 233 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 EFL1Q7Z2Z2 1120 aaKnown RBP8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 RD3Q7Z3Z2 195 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 MARCH9Q86YJ5 346 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 CDKL3Q8IVW4 592 aaPredicted RBP8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 SPATA13Q96N96 652 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 DEPDC7Q96QD5 511 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 FERMT1Q9BQL6 677 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 GSDMCQ9BYG8 508 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 CARD9Q9H257 536 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 C10orf88Q9H8K7 445 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 CARS2Q9HA77 564 aaKnown RBP8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 TRIM39Q9HCM9 518 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 IL26Q9NPH9 171 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 SPATS2LQ9NUQ6 558 aaKnown RBP8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 FEZ2Q9UHY8 353 aaPredicted RBP8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 RABGEF1Q9UJ41 708 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 TMPRSS11EQ9UL52 423 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 GUCA1BQ9UMX6 200 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 GPR34Q9UPC5 381 aa8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 R3HDM2Q9Y2K5 976 aaKnown RBP8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 PCYT1BQ9Y5K3 369 aaPredicted RBP8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 OAS3Q9Y6K5 1087 aaKnown RBP8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 ANKRD11Q6UB99 2663 aaPredicted RBP8.12□□□□□ -1.11
HDGFL3-205ENST00000568129 A0A1W2PQM1 296 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 A6NCN8 305 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 GOLGA6L9A6NEM1 432 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 SRRM3A6NNA2 597 aaPredicted RBP8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 KCNN4O15554 427 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 CCDC175P0C221 793 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 PIRTP0C851 137 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 CHRNA4P43681 627 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 GPR3P46089 330 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 FASLGP48023 281 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 PDX1P52945 283 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 CLDN6P56747 220 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 B4GALNT1Q00973 533 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 ZFP36L1Q07352 338 aaKnown RBP8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 ILF3Q12906 894 aaKnown RBP eCLIP8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 SIX1Q15475 284 aaPredicted RBP8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 PCSK7Q16549 785 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 ISXQ2M1V0 245 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 C14orf28Q4W4Y0 310 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 DRICH1Q6PGQ1 229 aaPredicted RBP8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 DARS2Q6PI48 645 aaKnown RBP8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 TAF8Q7Z7C8 310 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 ADGRG6Q86SQ4 1221 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 SLC13A5Q86YT5 568 aaPredicted RBP8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 NAGSQ8N159 534 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 KYQ8NBH2 561 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 FAM46DQ8NEK8 389 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 CCDC110Q8TBZ0 833 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 MAPK15Q8TD08 544 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 BRSK1Q8TDC3 778 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 GLYATL1Q969I3 302 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 PRR11Q96HE9 360 aaPredicted RBP8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 OR2M4Q96R27 311 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 CCDC3Q9BQI4 270 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 TLR10Q9BXR5 811 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 GPR63Q9BZJ6 419 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 CCDC86Q9H6F5 360 aaKnown RBP8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 GRPEL1Q9HAV7 217 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 SMOXQ9NWM0 555 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 TAAR2Q9P1P5 351 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 ATXN10Q9UBB4 475 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 RSPH14Q9UHP6 348 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 DOLKQ9UPQ8 538 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 SHOC2Q9UQ13 582 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 DRG1Q9Y295 367 aaKnown RBP8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 ZKSCAN5Q9Y2L8 839 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 TMEM98Q9Y2Y6 226 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 ENTPD2Q9Y5L3 495 aa8.11□□□□□ -1.11
HDGFL3-205ENST00000568129 CELSR3Q9NYQ7 3312 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 A0A087WV48 116 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 A0A1W2PNU3 283 aaPredicted RBP8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 CPED1A4D0V7 1026 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 PSMD3O43242 534 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 B4GAT1O43505 415 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 LIASO43766 372 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 VEGFDO43915 354 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 KCNJ13O60928 360 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 STK10O94804 968 aaKnown RBP8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 AGTP01019 485 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 ZNF8P17098 575 aaPredicted RBP8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 AK4P27144 223 aaPredicted RBP8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 PSMB4P28070 264 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 CCKBRP32239 447 aa8.1□□□□□ -1.11
HDGFL3-205ENST00000568129 MLLT3P42568 568 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms