RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 MTF2Q9Y483 593 aaPredicted RBP17.66■□□□□ 0.42
CMTM3-214ENST00000567572 COMMD3-BMI1R4GMX3 469 aa17.66■□□□□ 0.42
CMTM3-214ENST00000567572 LAMA2P24043 3122 aaKnown RBP17.65■□□□□ 0.42
CMTM3-214ENST00000567572 E7ENX8 843 aa17.65■□□□□ 0.42
CMTM3-214ENST00000567572 UBFD1O14562 309 aaKnown RBP17.65■□□□□ 0.42
CMTM3-214ENST00000567572 TGM5O43548 720 aa17.65■□□□□ 0.42
CMTM3-214ENST00000567572 CRTAMO95727 393 aa17.65■□□□□ 0.42
CMTM3-214ENST00000567572 IRF1P10914 325 aa17.65■□□□□ 0.42
CMTM3-214ENST00000567572 CES1P23141 567 aa17.65■□□□□ 0.42
CMTM3-214ENST00000567572 MRPL19P49406 292 aaKnown RBP17.65■□□□□ 0.42
CMTM3-214ENST00000567572 LBX1P52954 281 aa17.65■□□□□ 0.42
CMTM3-214ENST00000567572 ATP6V0D1P61421 351 aa17.65■□□□□ 0.42
CMTM3-214ENST00000567572 UGT3A2Q3SY77 523 aa17.65■□□□□ 0.42
CMTM3-214ENST00000567572 LILRA2Q8N149 483 aa17.65■□□□□ 0.42
CMTM3-214ENST00000567572 OR4L1Q8NH43 312 aa17.65■□□□□ 0.42
CMTM3-214ENST00000567572 TBATAQ96M53 351 aa17.65■□□□□ 0.42
CMTM3-214ENST00000567572 SH3GL3Q99963 347 aa17.65■□□□□ 0.42
CMTM3-214ENST00000567572 ZNF696Q9H7X3 374 aa17.65■□□□□ 0.42
CMTM3-214ENST00000567572 PACSIN3Q9UKS6 424 aa17.65■□□□□ 0.42
CMTM3-214ENST00000567572 TMCO1Q9UM00 188 aa17.65■□□□□ 0.42
CMTM3-214ENST00000567572 PADI4Q9UM07 663 aa17.65■□□□□ 0.42
CMTM3-214ENST00000567572 ARIH1Q9Y4X5 557 aaPredicted RBP17.65■□□□□ 0.42
CMTM3-214ENST00000567572 AP4B1Q9Y6B7 739 aa17.65■□□□□ 0.42
CMTM3-214ENST00000567572 BPTFQ12830 3046 aa17.65■□□□□ 0.42
CMTM3-214ENST00000567572 A0A1B0GVM2 712 aa17.64■□□□□ 0.42
CMTM3-214ENST00000567572 TCRBV3S1A0A5B6 114 aa17.64■□□□□ 0.42
CMTM3-214ENST00000567572 STX16-NPEPL1H3BU86 382 aa17.64■□□□□ 0.42
CMTM3-214ENST00000567572 FGBP02675 491 aa17.64■□□□□ 0.42
CMTM3-214ENST00000567572 SPATA31D3P0C874 917 aa17.64■□□□□ 0.42
CMTM3-214ENST00000567572 PLK1P53350 603 aa17.64■□□□□ 0.42
CMTM3-214ENST00000567572 PPIGQ13427 754 aaKnown RBP eCLIP17.64■□□□□ 0.42
CMTM3-214ENST00000567572 KANK2Q63ZY3 851 aa17.64■□□□□ 0.42
CMTM3-214ENST00000567572 NAIF1Q69YI7 327 aaPredicted RBP17.64■□□□□ 0.42
CMTM3-214ENST00000567572 ZNF549Q6P9A3 640 aa17.64■□□□□ 0.42
CMTM3-214ENST00000567572 AFTPHQ6ULP2 937 aa17.64■□□□□ 0.42
CMTM3-214ENST00000567572 CYHR1Q6ZMK1 362 aa17.64■□□□□ 0.42
CMTM3-214ENST00000567572 SPATA31D4Q6ZUB0 917 aa17.64■□□□□ 0.42
CMTM3-214ENST00000567572 EFL1Q7Z2Z2 1120 aaKnown RBP17.64■□□□□ 0.42
CMTM3-214ENST00000567572 TSPEARQ8WU66 669 aa17.64■□□□□ 0.42
CMTM3-214ENST00000567572 PBXIP1Q96AQ6 731 aa17.64■□□□□ 0.42
CMTM3-214ENST00000567572 PTERQ96BW5 349 aa17.64■□□□□ 0.42
CMTM3-214ENST00000567572 DNAJC1Q96KC8 554 aaKnown RBP17.64■□□□□ 0.42
CMTM3-214ENST00000567572 TRIB3Q96RU7 358 aa17.64■□□□□ 0.42
CMTM3-214ENST00000567572 SLC22A12Q96S37 553 aa17.64■□□□□ 0.42
CMTM3-214ENST00000567572 PKP2Q99959 881 aa17.64■□□□□ 0.42
CMTM3-214ENST00000567572 HOPXQ9BPY8 73 aaPredicted RBP17.64■□□□□ 0.42
CMTM3-214ENST00000567572 TRIM4Q9C037 500 aa17.64■□□□□ 0.42
CMTM3-214ENST00000567572 CCDC167Q9P0B6 97 aa17.64■□□□□ 0.42
CMTM3-214ENST00000567572 SEPT3Q9UH03 358 aa17.64■□□□□ 0.42
CMTM3-214ENST00000567572 NDUFAF1Q9Y375 327 aa17.64■□□□□ 0.42
CMTM3-214ENST00000567572 FIS1Q9Y3D6 152 aa17.64■□□□□ 0.42
CMTM3-214ENST00000567572 AP4S1Q9Y587 144 aa17.64■□□□□ 0.42
CMTM3-214ENST00000567572 MUSKO15146 869 aa17.64■□□□□ 0.41
CMTM3-214ENST00000567572 KERAO60938 352 aa17.64■□□□□ 0.41
CMTM3-214ENST00000567572 MATN4O95460 622 aa17.64■□□□□ 0.41
CMTM3-214ENST00000567572 LATS1O95835 1130 aa17.64■□□□□ 0.41
CMTM3-214ENST00000567572 MBL2P11226 248 aaPredicted RBP17.64■□□□□ 0.41
CMTM3-214ENST00000567572 CD9P21926 228 aa17.64■□□□□ 0.41
CMTM3-214ENST00000567572 PMLP29590 882 aa17.64■□□□□ 0.41
CMTM3-214ENST00000567572 SLC7A1P30825 629 aa17.64■□□□□ 0.41
CMTM3-214ENST00000567572 ETFBP38117 255 aa17.64■□□□□ 0.41
CMTM3-214ENST00000567572 PABPC1LQ4VXU2 614 aaKnown RBP17.64■□□□□ 0.41
CMTM3-214ENST00000567572 UBE2Q1Q7Z7E8 422 aa17.64■□□□□ 0.41
CMTM3-214ENST00000567572 KLHL23Q8NBE8 558 aa17.64■□□□□ 0.41
CMTM3-214ENST00000567572 OR7D4Q8NG98 312 aa17.64■□□□□ 0.41
CMTM3-214ENST00000567572 BLOC1S5Q8TDH9 187 aa17.64■□□□□ 0.41
CMTM3-214ENST00000567572 KIAA1191Q96A73 305 aa17.64■□□□□ 0.41
CMTM3-214ENST00000567572 PSKH2Q96QS6 385 aa17.64■□□□□ 0.41
CMTM3-214ENST00000567572 ATOH8Q96SQ7 321 aa17.64■□□□□ 0.41
CMTM3-214ENST00000567572 MRPS26Q9BYN8 205 aaKnown RBP17.64■□□□□ 0.41
CMTM3-214ENST00000567572 DERL2Q9GZP9 239 aa17.64■□□□□ 0.41
CMTM3-214ENST00000567572 VCX3AQ9NNX9 186 aa17.64■□□□□ 0.41
CMTM3-214ENST00000567572 NLE1Q9NVX2 485 aaPredicted RBP17.64■□□□□ 0.41
CMTM3-214ENST00000567572 SMPD4Q9NXE4 827 aa17.64■□□□□ 0.41
CMTM3-214ENST00000567572 ILVBLA1L0T0 632 aa17.63■□□□□ 0.41
CMTM3-214ENST00000567572 CCDC162PA2VCL2 907 aa17.63■□□□□ 0.41
CMTM3-214ENST00000567572 SYCE1LA8MT33 242 aa17.63■□□□□ 0.41
CMTM3-214ENST00000567572 AZIN1O14977 448 aa17.63■□□□□ 0.41
CMTM3-214ENST00000567572 GREM1O60565 184 aa17.63■□□□□ 0.41
CMTM3-214ENST00000567572 RPL5P46777 297 aaKnown RBP17.63■□□□□ 0.41
CMTM3-214ENST00000567572 FOXM1Q08050 763 aa17.63■□□□□ 0.41
CMTM3-214ENST00000567572 GRIK2Q13002 908 aa17.63■□□□□ 0.41
CMTM3-214ENST00000567572 DYNC1I2Q13409 638 aaKnown RBP17.63■□□□□ 0.41
CMTM3-214ENST00000567572 ADRM1Q16186 407 aa17.63■□□□□ 0.41
CMTM3-214ENST00000567572 PPP1R3AQ16821 1122 aa17.63■□□□□ 0.41
CMTM3-214ENST00000567572 CNPY1Q3B7I2 92 aa17.63■□□□□ 0.41
CMTM3-214ENST00000567572 LILRA6Q6PI73 481 aa17.63■□□□□ 0.41
CMTM3-214ENST00000567572 PIM3Q86V86 326 aa17.63■□□□□ 0.41
CMTM3-214ENST00000567572 HERC6Q8IVU3 1022 aa17.63■□□□□ 0.41
CMTM3-214ENST00000567572 PTGR2Q8N8N7 351 aaPredicted RBP17.63■□□□□ 0.41
CMTM3-214ENST00000567572 STAG3L4Q8TBR4 150 aa17.63■□□□□ 0.41
CMTM3-214ENST00000567572 ADAMTS19Q8TE59 1207 aa17.63■□□□□ 0.41
CMTM3-214ENST00000567572 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.63■□□□□ 0.41
CMTM3-214ENST00000567572 C1QTNF3Q9BXJ4 246 aa17.63■□□□□ 0.41
CMTM3-214ENST00000567572 TRIM15Q9C019 465 aa17.63■□□□□ 0.41
CMTM3-214ENST00000567572 TMEM45AQ9NWC5 275 aa17.63■□□□□ 0.41
CMTM3-214ENST00000567572 CXXC1Q9P0U4 656 aaPredicted RBP17.63■□□□□ 0.41
CMTM3-214ENST00000567572 INSL6Q9Y581 213 aa17.63■□□□□ 0.41
CMTM3-214ENST00000567572 TTC24A2A3L6 582 aaPredicted RBP17.62■□□□□ 0.41
CMTM3-214ENST00000567572 LCHNA4D1U4 455 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms