RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 BCAS1O75363 584 aaPredicted RBP15.61■□□□□ 0.09
COMMD4-215ENST00000566843 JRKO75564 520 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 CDKN2DP55273 166 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 FOXA1P55317 472 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 GABARAPL2P60520 117 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 CD300CQ08708 224 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 SPCS2Q15005 226 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 SPATA19Q7Z5L4 167 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 ITIH5Q86UX2 942 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 ATPAF2Q8N5M1 289 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 DNAJB14Q8TBM8 379 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 RPL10LQ96L21 214 aaKnown RBP15.61■□□□□ 0.09
COMMD4-215ENST00000566843 WDR12Q9GZL7 423 aaKnown RBP15.61■□□□□ 0.09
COMMD4-215ENST00000566843 NXF3Q9H4D5 531 aaKnown RBP15.61■□□□□ 0.09
COMMD4-215ENST00000566843 ARNT2Q9HBZ2 717 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 MID1IP1Q9NPA3 183 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 POLG2Q9UHN1 485 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 COL4A4P53420 1690 aaPredicted RBP15.61■□□□□ 0.09
COMMD4-215ENST00000566843 C16orf96A6NNT2 1141 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 DFFAO00273 331 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 TNPO2O14787 897 aaKnown RBP15.61■□□□□ 0.09
COMMD4-215ENST00000566843 PMPCBO75439 489 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 DNAJB5O75953 348 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 PAPSS2O95340 614 aaPredicted RBP15.61■□□□□ 0.09
COMMD4-215ENST00000566843 ALPLP05186 524 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 ALOX5P09917 674 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 PRR35P0CG20 571 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 THRBP10828 461 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 CDH1P12830 882 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 HGFP14210 728 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 RCAN2Q14206 197 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 RPS6KA2Q15349 733 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 XKR4Q5GH76 650 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 MARCH8Q5T0T0 291 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 TAF2Q6P1X5 1199 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 BHLHA9Q7RTU4 235 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 R3HCC1LQ7Z5L2 792 aaKnown RBP15.61■□□□□ 0.09
COMMD4-215ENST00000566843 IFNEQ86WN2 208 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 CILP2Q8IUL8 1156 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 MUL1Q969V5 352 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 VMP1Q96GC9 406 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 TSPAN18Q96SJ8 248 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 MED10Q9BTT4 135 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 HMG20AQ9NP66 347 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 ENPP5Q9UJA9 477 aa15.61■□□□□ 0.09
COMMD4-215ENST00000566843 PPP6CO00743 305 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 RSL1D1O76021 490 aaKnown RBP15.6■□□□□ 0.09
COMMD4-215ENST00000566843 HPRP00739 348 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 HLA-DQB2P05538 268 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 GSTT2P0CG29 244 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 GSTT2BP0CG30 244 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 KCNE1P15382 129 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 CD1DP15813 335 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 HPCAL1P37235 193 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 OCA2Q04671 838 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 SOX4Q06945 474 aaPredicted RBP15.6■□□□□ 0.09
COMMD4-215ENST00000566843 KCTD2Q14681 263 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 ZIK1Q3SY52 487 aaPredicted RBP15.6■□□□□ 0.09
COMMD4-215ENST00000566843 PAGE3Q5JUK9 113 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 KIAA0319Q5VV43 1072 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 GPRIN1Q7Z2K8 1008 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 KIAA2013Q8IYS2 634 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 PTGR2Q8N8N7 351 aaPredicted RBP15.6■□□□□ 0.09
COMMD4-215ENST00000566843 TUBGCP3Q96CW5 907 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 RDH12Q96NR8 316 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 SMOQ99835 787 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 FUNDC2Q9BWH2 189 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 FSD1LQ9BXM9 530 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 ING2Q9H160 280 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 GABRDO14764 452 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 S1PR4O95977 384 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 AKAP5P24588 427 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 LILRA4P59901 499 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 EMX2Q04743 252 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 AGAP7PQ5VUJ5 663 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 NOTUMQ6P988 496 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 CRTC3Q6UUV7 619 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 KDELC1Q6UW63 502 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 CATSPER4Q7RTX7 472 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 ANKRD13BQ86YJ7 626 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 CADM3Q8N126 398 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 AURKBQ96GD4 344 aaPredicted RBP15.6■□□□□ 0.09
COMMD4-215ENST00000566843 SEPHS2Q99611 448 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 C16orf70Q9BSU1 422 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 ATP13A1Q9HD20 1204 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 AIG1Q9NVV5 245 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 LEF1Q9UJU2 399 aaPredicted RBP15.6■□□□□ 0.09
COMMD4-215ENST00000566843 SLC27A5Q9Y2P5 690 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 PAPPA2Q9BXP8 1791 aa15.6■□□□□ 0.09
COMMD4-215ENST00000566843 SLC7A4O43246 635 aa15.59■□□□□ 0.09
COMMD4-215ENST00000566843 TULP3O75386 442 aa15.59■□□□□ 0.09
COMMD4-215ENST00000566843 MT-ND1P03886 318 aa15.59■□□□□ 0.09
COMMD4-215ENST00000566843 HTR1AP08908 422 aa15.59■□□□□ 0.09
COMMD4-215ENST00000566843 USP17L7P0C7H9 530 aa15.59■□□□□ 0.09
COMMD4-215ENST00000566843 ZNF24P17028 368 aa15.59■□□□□ 0.09
COMMD4-215ENST00000566843 EEF1DP29692 281 aaKnown RBP15.59■□□□□ 0.09
COMMD4-215ENST00000566843 RABGGTBP53611 331 aa15.59■□□□□ 0.09
COMMD4-215ENST00000566843 KCNK10P57789 538 aa15.59■□□□□ 0.09
COMMD4-215ENST00000566843 TRIM32Q13049 653 aa15.59■□□□□ 0.09
COMMD4-215ENST00000566843 ZNF362Q5T0B9 420 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms