RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 EID2BQ96D98 161 aa18.18■□□□□ 0.5
USB1-213ENST00000566292 WBP1Q96G27 269 aa18.18■□□□□ 0.5
USB1-213ENST00000566292 CCDC42Q96M95 316 aa18.18■□□□□ 0.5
USB1-213ENST00000566292 OLFM3Q96PB7 478 aa18.18■□□□□ 0.5
USB1-213ENST00000566292 TRIB3Q96RU7 358 aa18.18■□□□□ 0.5
USB1-213ENST00000566292 FOXJ2Q9P0K8 574 aa18.18■□□□□ 0.5
USB1-213ENST00000566292 PRKAB1Q9Y478 270 aa18.18■□□□□ 0.5
USB1-213ENST00000566292 ZNF462Q96JM2 2506 aa18.18■□□□□ 0.5
USB1-213ENST00000566292 IGHV1OR21-1A0A087WYE8 117 aa18.17■□□□□ 0.5
USB1-213ENST00000566292 IGHV5-10-1A0A0J9YXX1 117 aa18.17■□□□□ 0.5
USB1-213ENST00000566292 C9orf172C9J069 976 aa18.17■□□□□ 0.5
USB1-213ENST00000566292 KRT1P04264 644 aa18.17■□□□□ 0.5
USB1-213ENST00000566292 CSF2RBP32927 897 aa18.17■□□□□ 0.5
USB1-213ENST00000566292 BIRC2Q13490 618 aa18.17■□□□□ 0.5
USB1-213ENST00000566292 LRP8Q14114 963 aa18.17■□□□□ 0.5
USB1-213ENST00000566292 CLPPQ16740 277 aaPredicted RBP18.17■□□□□ 0.5
USB1-213ENST00000566292 B4GALNT4Q76KP1 1039 aa18.17■□□□□ 0.5
USB1-213ENST00000566292 LYSMD3Q7Z3D4 306 aa18.17■□□□□ 0.5
USB1-213ENST00000566292 RNF25Q96BH1 459 aaPredicted RBP18.17■□□□□ 0.5
USB1-213ENST00000566292 IMP4Q96G21 291 aaKnown RBP18.17■□□□□ 0.5
USB1-213ENST00000566292 CCDC74BQ96LY2 380 aa18.17■□□□□ 0.5
USB1-213ENST00000566292 SEMA4CQ9C0C4 833 aa18.17■□□□□ 0.5
USB1-213ENST00000566292 BRD8Q9H0E9 1235 aa18.17■□□□□ 0.5
USB1-213ENST00000566292 TSPY26PQ9H489 355 aa18.17■□□□□ 0.5
USB1-213ENST00000566292 FAM83DQ9H4H8 585 aa18.17■□□□□ 0.5
USB1-213ENST00000566292 WDR70Q9NW82 654 aa18.17■□□□□ 0.5
USB1-213ENST00000566292 PKD2L2Q9NZM6 624 aa18.17■□□□□ 0.5
USB1-213ENST00000566292 VPS18Q9P253 973 aa18.17■□□□□ 0.5
USB1-213ENST00000566292 ZNHIT2Q9UHR6 403 aa18.17■□□□□ 0.5
USB1-213ENST00000566292 HYOU1Q9Y4L1 999 aa18.17■□□□□ 0.5
USB1-213ENST00000566292 TRBV23OR9-2A0A075B6M9 112 aa18.16■□□□□ 0.5
USB1-213ENST00000566292 ZW10O43264 779 aa18.16■□□□□ 0.5
USB1-213ENST00000566292 TPM1P09493 284 aa18.16■□□□□ 0.5
USB1-213ENST00000566292 LIPCP11150 499 aa18.16■□□□□ 0.5
USB1-213ENST00000566292 CCL4P13236 92 aa18.16■□□□□ 0.5
USB1-213ENST00000566292 FASLGP48023 281 aa18.16■□□□□ 0.5
USB1-213ENST00000566292 LIMK2P53671 638 aa18.16■□□□□ 0.5
USB1-213ENST00000566292 LY6DQ14210 128 aa18.16■□□□□ 0.5
USB1-213ENST00000566292 PDK1Q15118 436 aa18.16■□□□□ 0.5
USB1-213ENST00000566292 LRRC38Q5VT99 294 aa18.16■□□□□ 0.5
USB1-213ENST00000566292 MFSD7Q6UXD7 560 aa18.16■□□□□ 0.5
USB1-213ENST00000566292 CHST15Q7LFX5 561 aaPredicted RBP18.16■□□□□ 0.5
USB1-213ENST00000566292 KDELC2Q7Z4H8 507 aa18.16■□□□□ 0.5
USB1-213ENST00000566292 ZFAND4Q86XD8 727 aa18.16■□□□□ 0.5
USB1-213ENST00000566292 ZNF761Q86XN6 746 aaPredicted RBP18.16■□□□□ 0.5
USB1-213ENST00000566292 RFX6Q8HWS3 928 aa18.16■□□□□ 0.5
USB1-213ENST00000566292 SFRP1Q8N474 314 aa18.16■□□□□ 0.5
USB1-213ENST00000566292 RNF214Q8ND24 703 aa18.16■□□□□ 0.5
USB1-213ENST00000566292 CCHCR1Q8TD31 782 aa18.16■□□□□ 0.5
USB1-213ENST00000566292 SLC37A2Q8TED4 501 aa18.16■□□□□ 0.5
USB1-213ENST00000566292 TADA1Q96BN2 335 aa18.16■□□□□ 0.5
USB1-213ENST00000566292 AGAP3Q96P47 875 aa18.16■□□□□ 0.5
USB1-213ENST00000566292 MAK16Q9BXY0 300 aaKnown RBP18.16■□□□□ 0.5
USB1-213ENST00000566292 ADGRE3Q9BY15 652 aa18.16■□□□□ 0.5
USB1-213ENST00000566292 TMEM9Q9P0T7 183 aa18.16■□□□□ 0.5
USB1-213ENST00000566292 SEPT10Q9P0V9 454 aa18.16■□□□□ 0.5
USB1-213ENST00000566292 RGSL1A5PLK6 1076 aa18.15■□□□□ 0.5
USB1-213ENST00000566292 HGSO14964 777 aaPredicted RBP18.15■□□□□ 0.5
USB1-213ENST00000566292 PIRTP0C851 137 aa18.15■□□□□ 0.5
USB1-213ENST00000566292 TNNT1P13805 278 aa18.15■□□□□ 0.5
USB1-213ENST00000566292 DYNLT1P63172 113 aa18.15■□□□□ 0.5
USB1-213ENST00000566292 SQSTM1Q13501 440 aa18.15■□□□□ 0.5
USB1-213ENST00000566292 TCEAL1Q15170 157 aa18.15■□□□□ 0.5
USB1-213ENST00000566292 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.15■□□□□ 0.5
USB1-213ENST00000566292 NT5DC3Q86UY8 548 aa18.15■□□□□ 0.5
USB1-213ENST00000566292 OR4D9Q8NGE8 314 aa18.15■□□□□ 0.5
USB1-213ENST00000566292 SLC25A51Q9H1U9 297 aa18.15■□□□□ 0.5
USB1-213ENST00000566292 ZFYVE1Q9HBF4 777 aa18.15■□□□□ 0.5
USB1-213ENST00000566292 KCNK4Q9NYG8 393 aa18.15■□□□□ 0.5
USB1-213ENST00000566292 TBC1D29Q9UFV1 150 aa18.15■□□□□ 0.5
USB1-213ENST00000566292 KCNK6Q9Y257 313 aa18.15■□□□□ 0.5
USB1-213ENST00000566292 PPP1R12AO14974 1030 aaPredicted RBP18.14■□□□□ 0.49
USB1-213ENST00000566292 THRAP10827 490 aa18.14■□□□□ 0.49
USB1-213ENST00000566292 ZFXP17010 805 aaPredicted RBP18.14■□□□□ 0.49
USB1-213ENST00000566292 MPSTP25325 297 aa18.14■□□□□ 0.49
USB1-213ENST00000566292 SLC1A1P43005 524 aa18.14■□□□□ 0.49
USB1-213ENST00000566292 NOP2P46087 812 aaKnown RBP18.14■□□□□ 0.49
USB1-213ENST00000566292 ARSDP51689 593 aa18.14■□□□□ 0.49
USB1-213ENST00000566292 TBX2Q13207 712 aaPredicted RBP18.14■□□□□ 0.49
USB1-213ENST00000566292 ZNF648Q5T619 568 aaPredicted RBP18.14■□□□□ 0.49
USB1-213ENST00000566292 DTX1Q86Y01 620 aa18.14■□□□□ 0.49
USB1-213ENST00000566292 RHOT1Q8IXI2 618 aa18.14■□□□□ 0.49
USB1-213ENST00000566292 GPR26Q8NDV2 337 aa18.14■□□□□ 0.49
USB1-213ENST00000566292 SPATA22Q8NHS9 363 aa18.14■□□□□ 0.49
USB1-213ENST00000566292 PMEPA1Q969W9 287 aa18.14■□□□□ 0.49
USB1-213ENST00000566292 ARFGAP3Q9NP61 516 aa18.14■□□□□ 0.49
USB1-213ENST00000566292 DDX56Q9NY93 547 aaKnown RBP18.14■□□□□ 0.49
USB1-213ENST00000566292 AKAP7Q9P0M2 348 aaPredicted RBP18.14■□□□□ 0.49
USB1-213ENST00000566292 INTUQ9ULD6 942 aa18.14■□□□□ 0.49
USB1-213ENST00000566292 SHOC2Q9UQ13 582 aa18.14■□□□□ 0.49
USB1-213ENST00000566292 A6NCN8 305 aa18.13■□□□□ 0.49
USB1-213ENST00000566292 MT-CYBP00156 380 aaPredicted RBP18.13■□□□□ 0.49
USB1-213ENST00000566292 FGF3P11487 239 aaPredicted RBP18.13■□□□□ 0.49
USB1-213ENST00000566292 ACP5P13686 325 aa18.13■□□□□ 0.49
USB1-213ENST00000566292 COMTP21964 271 aa18.13■□□□□ 0.49
USB1-213ENST00000566292 CDKN2BP42772 138 aa18.13■□□□□ 0.49
USB1-213ENST00000566292 GPLD1P80108 840 aa18.13■□□□□ 0.49
USB1-213ENST00000566292 CDK18Q07002 472 aa18.13■□□□□ 0.49
USB1-213ENST00000566292 TRA2AQ13595 282 aaKnown RBP eCLIP18.13■□□□□ 0.49
USB1-213ENST00000566292 SLC14A2Q15849 920 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms