RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 GPR33Q49SQ1 333 aa30.39■■■□□ 2.46
CTCF-203ENST00000566078 CERS6Q6ZMG9 384 aa30.39■■■□□ 2.46
CTCF-203ENST00000566078 UBALD2Q8IYN6 164 aa30.39■■■□□ 2.46
CTCF-203ENST00000566078 SYNPOQ8N3V7 929 aa30.39■■■□□ 2.46
CTCF-203ENST00000566078 SCAMP4Q969E2 229 aa30.39■■■□□ 2.46
CTCF-203ENST00000566078 APOPT1Q96IL0 206 aa30.39■■■□□ 2.46
CTCF-203ENST00000566078 CORO1CQ9ULV4 474 aaPredicted RBP30.39■■■□□ 2.46
CTCF-203ENST00000566078 SCML1Q9UN30 329 aa30.39■■■□□ 2.46
CTCF-203ENST00000566078 SMG5Q9UPR3 1016 aaKnown RBP30.39■■■□□ 2.46
CTCF-203ENST00000566078 KANSL1LA0AUZ9 987 aa30.38■■■□□ 2.45
CTCF-203ENST00000566078 PRPF4O43172 522 aaKnown RBP eCLIP30.38■■■□□ 2.45
CTCF-203ENST00000566078 POLD2P49005 469 aa30.38■■■□□ 2.45
CTCF-203ENST00000566078 ITGA9Q13797 1035 aa30.38■■■□□ 2.45
CTCF-203ENST00000566078 CRY1Q16526 586 aa30.38■■■□□ 2.45
CTCF-203ENST00000566078 DBN1Q16643 649 aa30.38■■■□□ 2.45
CTCF-203ENST00000566078 ATP13A5Q4VNC0 1218 aa30.38■■■□□ 2.45
CTCF-203ENST00000566078 NRSN1Q8IZ57 195 aa30.38■■■□□ 2.45
CTCF-203ENST00000566078 BANPQ8N9N5 519 aa30.38■■■□□ 2.45
CTCF-203ENST00000566078 FLCNQ8NFG4 579 aa30.38■■■□□ 2.45
CTCF-203ENST00000566078 ACMSDQ8TDX5 336 aa30.38■■■□□ 2.45
CTCF-203ENST00000566078 DTD2Q96FN9 168 aa30.38■■■□□ 2.45
CTCF-203ENST00000566078 FOXQ1Q9C009 403 aa30.38■■■□□ 2.45
CTCF-203ENST00000566078 CDH19Q9H159 772 aa30.38■■■□□ 2.45
CTCF-203ENST00000566078 CNOT10Q9H9A5 744 aaKnown RBP30.38■■■□□ 2.45
CTCF-203ENST00000566078 TYROBPO43914 113 aa30.37■■■□□ 2.45
CTCF-203ENST00000566078 LZTS3O60299 673 aaPredicted RBP30.37■■■□□ 2.45
CTCF-203ENST00000566078 NDUFV2P19404 249 aa30.37■■■□□ 2.45
CTCF-203ENST00000566078 ACRV1P26436 265 aa30.37■■■□□ 2.45
CTCF-203ENST00000566078 ZBTB16Q05516 673 aa30.37■■■□□ 2.45
CTCF-203ENST00000566078 HECTD2Q5U5R9 776 aa30.37■■■□□ 2.45
CTCF-203ENST00000566078 KIAA1324Q6UXG2 1013 aaKnown RBP30.37■■■□□ 2.45
CTCF-203ENST00000566078 RAVER1Q8IY67 606 aaKnown RBP30.37■■■□□ 2.45
CTCF-203ENST00000566078 MRGPRX1Q96LB2 322 aa30.37■■■□□ 2.45
CTCF-203ENST00000566078 TTC1Q99614 292 aa30.37■■■□□ 2.45
CTCF-203ENST00000566078 RIOK2Q9BVS4 552 aaKnown RBP30.37■■■□□ 2.45
CTCF-203ENST00000566078 ABCG8Q9H221 673 aa30.37■■■□□ 2.45
CTCF-203ENST00000566078 TSPAN6O43657 245 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 OR1I1O60431 355 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 PPARGP37231 505 aaPredicted RBP30.36■■■□□ 2.45
CTCF-203ENST00000566078 POU4F1Q01851 419 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 PDE1CQ14123 709 aaPredicted RBP30.36■■■□□ 2.45
CTCF-203ENST00000566078 HENMT1Q5T8I9 393 aaKnown RBP30.36■■■□□ 2.45
CTCF-203ENST00000566078 LYPLAL1Q5VWZ2 237 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 ZNF549Q6P9A3 640 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 CYP2U1Q7Z449 544 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 NXPE1Q8N323 547 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 ANKRD42Q8N9B4 389 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 MDM1Q8TC05 714 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 ATXN2LQ8WWM7 1075 aaKnown RBP30.36■■■□□ 2.45
CTCF-203ENST00000566078 NUS1Q96E22 293 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 FAM47DPA6NHR8 397 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 AGAP14A8MT82 685 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 CHURC1-FNTBB4DL54 471 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 COPEO14579 308 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 FMO4P31512 558 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 PTGER3P43115 390 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 SLC12A2P55011 1212 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 TAS2R39P59534 338 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 ZNF284Q2VY69 593 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 PPM1JQ5JR12 505 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 FAM45BPQ6NSW5 357 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 TRAM1L1Q8N609 369 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 FAM45AQ8TCE6 357 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 FAM131CQ96AQ9 280 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 ULK4Q96C45 1275 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 AP2M1Q96CW1 435 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 SLC13A1Q9BZW2 595 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 VPS11Q9H270 941 aa30.36■■■□□ 2.45
CTCF-203ENST00000566078 FAM170BA6NMN3 283 aa30.35■■■□□ 2.45
CTCF-203ENST00000566078 RECQL5O94762 991 aaPredicted RBP30.35■■■□□ 2.45
CTCF-203ENST00000566078 PCDH8O95206 1070 aa30.35■■■□□ 2.45
CTCF-203ENST00000566078 MPOP05164 745 aa30.35■■■□□ 2.45
CTCF-203ENST00000566078 ACADMP11310 421 aa30.35■■■□□ 2.45
CTCF-203ENST00000566078 STMN1P16949 149 aa30.35■■■□□ 2.45
CTCF-203ENST00000566078 PGGT1BP53609 377 aa30.35■■■□□ 2.45
CTCF-203ENST00000566078 MPP2Q14168 576 aa30.35■■■□□ 2.45
CTCF-203ENST00000566078 RAPH1Q70E73 1250 aa30.35■■■□□ 2.45
CTCF-203ENST00000566078 OLFM1Q99784 485 aa30.35■■■□□ 2.45
CTCF-203ENST00000566078 ZSCAN5AQ9BUG6 496 aa30.35■■■□□ 2.45
CTCF-203ENST00000566078 CCDC68Q9H2F9 335 aa30.35■■■□□ 2.45
CTCF-203ENST00000566078 MKS1Q9NXB0 559 aa30.35■■■□□ 2.45
CTCF-203ENST00000566078 A0A096LPK6 155 aa30.34■■■□□ 2.45
CTCF-203ENST00000566078 PHGDHO43175 533 aaKnown RBP30.34■■■□□ 2.45
CTCF-203ENST00000566078 C7P10643 843 aa30.34■■■□□ 2.45
CTCF-203ENST00000566078 GABRG2P18507 467 aa30.34■■■□□ 2.45
CTCF-203ENST00000566078 RAB10P61026 200 aa30.34■■■□□ 2.45
CTCF-203ENST00000566078 FZD5Q13467 585 aa30.34■■■□□ 2.45
CTCF-203ENST00000566078 ZNF460Q14592 562 aa30.34■■■□□ 2.45
CTCF-203ENST00000566078 CEP97Q8IW35 865 aa30.34■■■□□ 2.45
CTCF-203ENST00000566078 DTX3LQ8TDB6 740 aa30.34■■■□□ 2.45
CTCF-203ENST00000566078 CABS1Q96KC9 395 aa30.34■■■□□ 2.45
CTCF-203ENST00000566078 ASB2Q96Q27 587 aa30.34■■■□□ 2.45
CTCF-203ENST00000566078 AARSD1Q9BTE6 412 aaKnown RBP30.34■■■□□ 2.45
CTCF-203ENST00000566078 POLMQ9NP87 494 aaPredicted RBP30.34■■■□□ 2.45
CTCF-203ENST00000566078 MUTYHQ9UIF7 546 aa30.34■■■□□ 2.45
CTCF-203ENST00000566078 VWA7Q9Y334 891 aa30.34■■■□□ 2.45
CTCF-203ENST00000566078 PLRG1O43660 514 aaKnown RBP30.33■■■□□ 2.45
CTCF-203ENST00000566078 CHN1P15882 459 aa30.33■■■□□ 2.45
CTCF-203ENST00000566078 RPA3P35244 121 aaPredicted RBP30.33■■■□□ 2.45
CTCF-203ENST00000566078 ZKSCAN8Q15776 578 aaPredicted RBP30.33■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms