RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 SNRNP25Q9BV90 132 aaKnown RBP12.65□□□□□ -0.38
RNF40-208ENST00000565995 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.65□□□□□ -0.38
RNF40-208ENST00000565995 RBSNQ9H1K0 784 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 UCK1Q9HA47 277 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 CWC15Q9P013 229 aaKnown RBP12.65□□□□□ -0.38
RNF40-208ENST00000565995 POLHQ9Y253 713 aa12.65□□□□□ -0.38
RNF40-208ENST00000565995 MRPS18BQ9Y676 258 aaKnown RBP12.65□□□□□ -0.38
RNF40-208ENST00000565995 ANKRD12Q6UB98 2062 aa12.65□□□□□ -0.39
RNF40-208ENST00000565995 TRBV23OR9-2A0A075B6M9 112 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 OR5K4A6NMS3 321 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 DAPK3O43293 454 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 MAFKO60675 156 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 MAP3K6O95382 1288 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 NR1D1P20393 614 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 DLSTP36957 453 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 CLCNKAP51800 687 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 COPB1P53618 953 aaKnown RBP12.64□□□□□ -0.39
RNF40-208ENST00000565995 PMS2P54278 862 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 MAMLD1Q13495 774 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 IL11RAQ14626 422 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 PTPRRQ15256 657 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 SNAP47Q5SQN1 464 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 CDKAL1Q5VV42 579 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 PLEKHA7Q6IQ23 1121 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 DOK6Q6PKX4 331 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 C6orf15Q6UXA7 325 aaPredicted RBP12.64□□□□□ -0.39
RNF40-208ENST00000565995 RFLNAQ6ZTI6 216 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 ASB18Q6ZVZ8 466 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 USP45Q70EL2 814 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 LYSMD3Q7Z3D4 306 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 SLC9B2Q86UD5 537 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 PLXDC1Q8IUK5 500 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 AVL9Q8NBF6 648 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 PDCD6IPQ8WUM4 868 aaKnown RBP12.64□□□□□ -0.39
RNF40-208ENST00000565995 HERPUD2Q9BSE4 406 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 RMI1Q9H9A7 625 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 FAM207AQ9NSI2 230 aaPredicted RBP12.64□□□□□ -0.39
RNF40-208ENST00000565995 CUEDC1Q9NWM3 386 aaPredicted RBP12.64□□□□□ -0.39
RNF40-208ENST00000565995 TBC1D29Q9UFV1 150 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 KCND3Q9UK17 655 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 TLK1Q9UKI8 766 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 CNOT6Q9ULM6 557 aaKnown RBP12.64□□□□□ -0.39
RNF40-208ENST00000565995 PCYT1BQ9Y5K3 369 aaPredicted RBP12.64□□□□□ -0.39
RNF40-208ENST00000565995 PIKFYVEQ9Y2I7 2098 aa12.64□□□□□ -0.39
RNF40-208ENST00000565995 ABCA12Q86UK0 2595 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 KIR2DS5A0A0G2JLQ3 304 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 A0A0G2JNG1 304 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 GOLGA6CA6NDK9 693 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 GOLGA6BA6NDN3 693 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 LILRA5A6NI73 299 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 KIR2DS3K7RE56 304 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 VPS4BO75351 444 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 RFPL1O75677 317 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 GOLGA6DP0CG33 693 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 F3P13726 295 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 SLC2A4P14672 509 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 ZNF28P17035 718 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 XRCC1P18887 633 aaPredicted RBP12.63□□□□□ -0.39
RNF40-208ENST00000565995 TNFAIP3P21580 790 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 ZNF235Q14590 738 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 KIR2DS5Q14953 304 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 IQCB1Q15051 598 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 ARMC12Q5T9G4 340 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 FHL5Q5TD97 284 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 LRRC66Q68CR7 880 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 HIST2H2BCQ6DN03 193 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 PPP1R2P3Q6NXS1 205 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 NDUFAF2Q8N183 169 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 TEX26Q8N6G2 289 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 ANKRD20A12PQ8NF67 263 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 FNIP1Q8TF40 1166 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 SSC4DQ8WTU2 575 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 SCAMP4Q969E2 229 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 C9orf72Q96LT7 481 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 AGAP2Q99490 1192 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 SYT11Q9BT88 431 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 STN1Q9H668 368 aaKnown RBP12.63□□□□□ -0.39
RNF40-208ENST00000565995 MLXIPLQ9NP71 852 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 PARVAQ9NVD7 372 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 FANCLQ9NW38 375 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 GOLGA6AQ9NYA3 693 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 TAB2Q9NYJ8 693 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 CD84Q9UIB8 345 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 CROTQ9UKG9 612 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 VPS4AQ9UN37 437 aa12.63□□□□□ -0.39
RNF40-208ENST00000565995 MDC1Q14676 2089 aaKnown RBP12.63□□□□□ -0.39
RNF40-208ENST00000565995 A0A0J9YYE9 177 aa12.62□□□□□ -0.39
RNF40-208ENST00000565995 TMEM191CA6NGB0 347 aa12.62□□□□□ -0.39
RNF40-208ENST00000565995 ENO4A6NNW6 628 aa12.62□□□□□ -0.39
RNF40-208ENST00000565995 CREG1O75629 220 aa12.62□□□□□ -0.39
RNF40-208ENST00000565995 TRBC1P01850 177 aa12.62□□□□□ -0.39
RNF40-208ENST00000565995 PDHA1P08559 390 aa12.62□□□□□ -0.39
RNF40-208ENST00000565995 FGF5P12034 268 aa12.62□□□□□ -0.39
RNF40-208ENST00000565995 ATP1A3P13637 1013 aa12.62□□□□□ -0.39
RNF40-208ENST00000565995 CDK11BP21127 795 aaKnown RBP12.62□□□□□ -0.39
RNF40-208ENST00000565995 MIPP30301 263 aa12.62□□□□□ -0.39
RNF40-208ENST00000565995 NOP2P46087 812 aaKnown RBP12.62□□□□□ -0.39
RNF40-208ENST00000565995 UQCRFS1P47985 274 aa12.62□□□□□ -0.39
RNF40-208ENST00000565995 STC1P52823 247 aa12.62□□□□□ -0.39
RNF40-208ENST00000565995 UBE2IP63279 158 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms