RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 ANXA2RQ3ZCQ2 193 aa4.34□□□□□ -1.72
LINC00561-201ENST00000565815 FAM69AQ5T7M9 428 aa4.34□□□□□ -1.72
LINC00561-201ENST00000565815 HAUS3Q68CZ6 603 aa4.34□□□□□ -1.72
LINC00561-201ENST00000565815 SNRNP48Q6IEG0 339 aaKnown RBP4.34□□□□□ -1.72
LINC00561-201ENST00000565815 MTHFD1LQ6UB35 978 aa4.34□□□□□ -1.72
LINC00561-201ENST00000565815 MOB3CQ70IA8 216 aa4.34□□□□□ -1.72
LINC00561-201ENST00000565815 PDILTQ8N807 584 aa4.34□□□□□ -1.72
LINC00561-201ENST00000565815 FAM133AQ8N9E0 248 aa4.34□□□□□ -1.72
LINC00561-201ENST00000565815 DHX58Q96C10 678 aa4.34□□□□□ -1.72
LINC00561-201ENST00000565815 NUP58Q9BVL2 599 aa4.34□□□□□ -1.72
LINC00561-201ENST00000565815 QTRT1Q9BXR0 403 aaKnown RBP4.34□□□□□ -1.72
LINC00561-201ENST00000565815 TSGA10Q9BZW7 698 aa4.34□□□□□ -1.72
LINC00561-201ENST00000565815 SEMA4GQ9NTN9 838 aa4.34□□□□□ -1.72
LINC00561-201ENST00000565815 RWDD2AQ9UIY3 292 aa4.34□□□□□ -1.72
LINC00561-201ENST00000565815 NFU1Q9UMS0 254 aa4.34□□□□□ -1.72
LINC00561-201ENST00000565815 WNT6Q9Y6F9 365 aa4.34□□□□□ -1.72
LINC00561-201ENST00000565815 ERICH4A6NGS2 130 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 EPOPA6NHQ4 379 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 PER2O15055 1255 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 USP12O75317 370 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 PGK2P07205 417 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 MYOGP15173 224 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 BMP5P22003 454 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 PRKCHP24723 683 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 HNF1BP35680 557 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 MAGEA9P43362 315 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 MTNR1AP48039 350 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 AKAP17AQ02040 695 aaKnown RBP4.33□□□□□ -1.72
LINC00561-201ENST00000565815 RHAGQ02094 409 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 COASYQ13057 564 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 CXCL17Q6UXB2 119 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 RBM44Q6ZP01 1051 aaKnown RBP4.33□□□□□ -1.72
LINC00561-201ENST00000565815 DIS3L2Q8IYB7 885 aaKnown RBP4.33□□□□□ -1.72
LINC00561-201ENST00000565815 TEX19Q8NA77 164 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 ANKRD52Q8NB46 1076 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 PERPQ96FX8 193 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 ZNF845Q96IR2 970 aaPredicted RBP4.33□□□□□ -1.72
LINC00561-201ENST00000565815 TRPV6Q9H1D0 765 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 RASSF1Q9NS23 344 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 AASSQ9UDR5 926 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 ANAPC4Q9UJX5 808 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 KMT2EQ8IZD2 1858 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 A0A1W2PPH5 198 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 TMEM191CA6NGB0 347 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 H7C1Q1 480 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 IFIT3O14879 490 aaKnown RBP4.33□□□□□ -1.72
LINC00561-201ENST00000565815 JTBO76095 146 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 CBX6O95503 412 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 URODP06132 367 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 FCGR2AP12318 317 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 CYP4B1P13584 511 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 CLCN5P51795 746 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 NAA25Q14CX7 972 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 WTAPQ15007 396 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 GPR68Q15743 365 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 ODF3L2Q3SX64 289 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 SLC45A4Q5BKX6 768 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 KIAA1755Q5JYT7 1200 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 FBXO42Q6P3S6 717 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 LRRC8DQ7L1W4 858 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 APTXQ7Z2E3 356 aaKnown RBP4.33□□□□□ -1.72
LINC00561-201ENST00000565815 DGLUCYQ7Z3D6 616 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 GRASPQ7Z6J2 395 aaPredicted RBP4.33□□□□□ -1.72
LINC00561-201ENST00000565815 EFCAB13Q8IY85 973 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 CCDC170Q8IYT3 715 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 PCYOX1LQ8NBM8 494 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 CMASQ8NFW8 434 aaPredicted RBP4.33□□□□□ -1.72
LINC00561-201ENST00000565815 OSR1Q8TAX0 266 aaPredicted RBP4.33□□□□□ -1.72
LINC00561-201ENST00000565815 GDPD5Q8WTR4 605 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 P2RX5Q93086 422 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 ZNF419Q96HQ0 510 aaPredicted RBP4.33□□□□□ -1.72
LINC00561-201ENST00000565815 BARD1Q99728 777 aaKnown RBP4.33□□□□□ -1.72
LINC00561-201ENST00000565815 NAPBQ9H115 298 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 CUEDC2Q9H467 287 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 ANKZF1Q9H8Y5 726 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 SLC38A10Q9HBR0 1119 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 SEMA4BQ9NPR2 832 aaPredicted RBP4.33□□□□□ -1.72
LINC00561-201ENST00000565815 TMEM184CQ9NVA4 438 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 SMCHD1A6NHR9 2005 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 NAV1Q8NEY1 1877 aa4.33□□□□□ -1.72
LINC00561-201ENST00000565815 A0A1W2PRG0 241 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 SH2D7A6NKC9 451 aaPredicted RBP4.32□□□□□ -1.72
LINC00561-201ENST00000565815 SRRM3A6NNA2 597 aaPredicted RBP4.32□□□□□ -1.72
LINC00561-201ENST00000565815 TMEM232C9JQI7 657 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 LDLRAD4O15165 306 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 POLR3GO15318 223 aaPredicted RBP4.32□□□□□ -1.72
LINC00561-201ENST00000565815 POLR2DO15514 142 aaKnown RBP4.32□□□□□ -1.72
LINC00561-201ENST00000565815 PLAUP00749 431 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 PRLRP16471 622 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 CYLC1P35663 651 aaPredicted RBP4.32□□□□□ -1.72
LINC00561-201ENST00000565815 KRT2P35908 639 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 USP8P40818 1118 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 STIM1Q13586 685 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 ALKBH1Q13686 389 aaKnown RBP4.32□□□□□ -1.72
LINC00561-201ENST00000565815 EFR3AQ14156 821 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 FCRLBQ6BAA4 426 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 ZNF788Q6ZQV5 615 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 MFSD6Q6ZSS7 791 aa4.32□□□□□ -1.72
LINC00561-201ENST00000565815 R3HCC1LQ7Z5L2 792 aaKnown RBP4.32□□□□□ -1.72
LINC00561-201ENST00000565815 DEFB128Q7Z7B8 93 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms