RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 PAFAH2Q99487 392 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 C2orf49Q9BVC5 232 aaPredicted RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 KCNN2Q9H2S1 579 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 PNPOQ9NVS9 261 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 KLHL8Q9P2G9 620 aaPredicted RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 HSFX1Q9UBD0 423 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 OR12D3Q9UGF7 316 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 TRPS1Q9UHF7 1281 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 BARX2Q9UMQ3 279 aaPredicted RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 EEF2KO00418 725 aaKnown RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 MGRN1O60291 552 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 DIAPH2O60879 1101 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 TADA2AO75478 443 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 DARSP14868 501 aaKnown RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 KLRC2P26717 231 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 PGM1P36871 562 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 BLVRAP53004 296 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 METAP1P53582 386 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 ACSM2AQ08AH3 577 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 NR1D2Q14995 579 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 TCEAL1Q15170 157 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 NCBP2-AS2Q69YL0 99 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 NXNQ6DKJ4 435 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 CLEC6AQ6EIG7 209 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 PAOXQ6QHF9 649 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 SHDQ96IW2 340 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 LRIG1Q96JA1 1093 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 SNX27Q96L92 541 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 MARCH7Q9H992 704 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 CREBZFQ9NS37 354 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 ZSCAN32Q9NX65 697 aa3.35□□□□□ -1.87
CHD9-213ENST00000564845 NKX1-2Q9UD57 310 aaPredicted RBP3.35□□□□□ -1.87
CHD9-213ENST00000564845 EIF3FO00303 357 aaPredicted RBP3.34□□□□□ -1.87
CHD9-213ENST00000564845 FKBP6O75344 327 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 ALPIP09923 528 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 PEX19P40855 299 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 SLC5A3P53794 718 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 PDK1Q15118 436 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 SLC14A2Q15849 920 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 HIF1AQ16665 826 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 TTC23Q5W5X9 447 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 MILR1Q7Z6M3 343 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 SLC41A1Q8IVJ1 513 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 YAF2Q8IY57 180 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 GPR65Q8IYL9 337 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 TMEM145Q8NBT3 493 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 PSMG2Q969U7 264 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 PSKH2Q96QS6 385 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 KCNA7Q96RP8 456 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 MTMR10Q9NXD2 777 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 FKBPLQ9UIM3 349 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 PTNP21246 168 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 APLP1P51693 650 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 C2orf80Q0P641 193 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 PLEKHM3Q6ZWE6 761 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 GLB1L2Q8IW92 636 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 UBR7Q8N806 425 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 OR13C4Q8NGS5 318 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 LINC01599Q8WXQ3 324 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 C12orf4Q9NQ89 552 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 SPATA7Q9P0W8 599 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 PCDHGB7Q9Y5F8 929 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 A0A0J9YVX5 310 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 C2CD4BA6NLJ0 364 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 H3BNH8 94 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 CYB5BO43169 146 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 NBNO60934 754 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 PIGNO95427 931 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 ACADSP16219 412 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 TNNI3P19429 210 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 CNTN1Q12860 1018 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 PYHIN1Q6K0P9 492 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 RINLQ6ZS11 566 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 YTHDF3Q7Z739 585 aaKnown RBP3.34□□□□□ -1.87
CHD9-213ENST00000564845 OR4C15Q8NGM1 316 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 GATAD2BQ8WXI9 593 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 DCUN1D1Q96GG9 259 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 C12orf42Q96LP6 360 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 NEUROD4Q9HD90 331 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 SLC35C2Q9NQQ7 365 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 KRT84Q9NSB2 600 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 MRPS17Q9Y2R5 130 aaKnown RBP3.34□□□□□ -1.87
CHD9-213ENST00000564845 NPIPA5A0A0B4J1W7 369 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 E9PBE3 544 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 TPP1O14773 563 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 SIN3BO75182 1162 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 VAPBO95292 243 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 NEK3P51956 506 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 LAPTM5Q13571 262 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 FAM46CQ5VWP2 391 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 BICRALQ6AI39 1079 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 ESRP1Q6NXG1 681 aaKnown RBP3.34□□□□□ -1.87
CHD9-213ENST00000564845 XKRXQ6PP77 449 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 FIP1L1Q6UN15 594 aaKnown RBP3.34□□□□□ -1.87
CHD9-213ENST00000564845 PEG10Q86TG7 708 aaKnown RBP3.34□□□□□ -1.87
CHD9-213ENST00000564845 ZNF567Q8N184 647 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 KLHL23Q8NBE8 558 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 PIK3C3Q8NEB9 887 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 WDR48Q8TAF3 677 aa3.34□□□□□ -1.87
CHD9-213ENST00000564845 LRCH3Q96II8 777 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms