RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 GPC6Q9Y625 555 aaPredicted RBP20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 OAS3Q9Y6K5 1087 aaKnown RBP20.41■□□□□ 0.86
MAP1LC3B-206ENST00000564844 SOBPA7XYQ1 873 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 NCAM2O15394 837 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 PIGAP37287 484 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 AFF1P51825 1210 aaKnown RBP20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 KCNK10P57789 538 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 GLYATQ6IB77 296 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 PACRGLQ8N7B6 248 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 SH3YL1Q96HL8 342 aaPredicted RBP20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ALPK1Q96QP1 1244 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 SMOQ99835 787 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 CCDC68Q9H2F9 335 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 TOR3AQ9H497 397 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 RGS18Q9NS28 235 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 PCDHB3Q9Y5E6 796 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 CNOT3O75175 753 aaKnown RBP20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 TTKP33981 857 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 OCA2Q04671 838 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 OR4D1Q15615 310 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ARMCX2Q7L311 632 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 TAC4Q86UU9 113 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 FIG4Q92562 907 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 HTRA1Q92743 480 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 BAG5Q9UL15 447 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 FAM32AQ9Y421 112 aaKnown RBP20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 UBA6A0AVT1 1052 aaPredicted RBP20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ASPDHA6ND91 283 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 STAU1O95793 577 aaKnown RBP20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 C1RP00736 705 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ALDH2P05091 517 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 AGTR2P50052 363 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 TPTEP56180 551 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 NRG1Q02297 640 aaPredicted RBP20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ZBTB6Q15916 424 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 NOL9Q5SY16 702 aaKnown RBP20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 LRRC52Q8N7C0 313 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 HASPINQ8TF76 798 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 TBATAQ96M53 351 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 TBCDQ9BTW9 1192 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 ALOXE3Q9BYJ1 711 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 CRTAC1Q9NQ79 661 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 PCDHA9Q9Y5H5 950 aa20.4■□□□□ 0.86
MAP1LC3B-206ENST00000564844 SUPT3HB4E1H0 165 aa20.39■□□□□ 0.85
MAP1LC3B-206ENST00000564844 AQP9O43315 295 aa20.39■□□□□ 0.85
MAP1LC3B-206ENST00000564844 CD86P42081 329 aa20.39■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ARSFP54793 590 aa20.39■□□□□ 0.85
MAP1LC3B-206ENST00000564844 SLC27A1Q6PCB7 646 aa20.39■□□□□ 0.85
MAP1LC3B-206ENST00000564844 SPARTQ8N0X7 666 aa20.39■□□□□ 0.85
MAP1LC3B-206ENST00000564844 GLMNQ92990 594 aa20.39■□□□□ 0.85
MAP1LC3B-206ENST00000564844 NRBF2Q96F24 287 aa20.39■□□□□ 0.85
MAP1LC3B-206ENST00000564844 CD320Q9NPF0 282 aa20.39■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ITM2CQ9NQX7 267 aa20.39■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ABCD2Q9UBJ2 740 aa20.39■□□□□ 0.85
MAP1LC3B-206ENST00000564844 UBQLN1Q9UMX0 589 aaKnown RBP20.39■□□□□ 0.85
MAP1LC3B-206ENST00000564844 GNGT2O14610 69 aa20.39■□□□□ 0.85
MAP1LC3B-206ENST00000564844 MTSS1O43312 755 aa20.39■□□□□ 0.85
MAP1LC3B-206ENST00000564844 LBPP18428 481 aa20.39■□□□□ 0.85
MAP1LC3B-206ENST00000564844 HRH2P25021 359 aa20.39■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ACADVLP49748 655 aa20.39■□□□□ 0.85
MAP1LC3B-206ENST00000564844 DGKQP52824 942 aa20.39■□□□□ 0.85
MAP1LC3B-206ENST00000564844 VBP1P61758 197 aa20.39■□□□□ 0.85
MAP1LC3B-206ENST00000564844 CCNA1P78396 465 aa20.39■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ADARB1P78563 741 aaKnown RBP20.39■□□□□ 0.85
MAP1LC3B-206ENST00000564844 SLC13A2Q13183 592 aa20.39■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ZNF484Q5JVG2 852 aa20.39■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ARRDC4Q8NCT1 418 aa20.39■□□□□ 0.85
MAP1LC3B-206ENST00000564844 PCED1BQ96HM7 432 aa20.39■□□□□ 0.85
MAP1LC3B-206ENST00000564844 PCDHGA11Q9Y5H2 935 aa20.39■□□□□ 0.85
MAP1LC3B-206ENST00000564844 CCDC154A6NI56 674 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ANXA9O76027 345 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 HSD17B1P14061 328 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ZNF24P17028 368 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 GRIK4Q16099 956 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 MINDY1Q8N5J2 469 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 SCAMP5Q8TAC9 235 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 CCDC126Q96EE4 140 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 SLC2A13Q96QE2 648 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ZNF112Q9UJU3 913 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ZNF229Q9UJW7 825 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 KPNA4O00629 521 aaPredicted RBP20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 LSM1O15116 133 aaKnown RBP20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 CLASP2O75122 1294 aaKnown RBP20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 CCR1P32246 355 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 BNIP2Q12982 314 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 INAVAQ3KP66 663 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 CNTN4Q8IWV2 1026 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 DCP1BQ8IZD4 617 aaKnown RBP20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ZMIZ2Q8NF64 920 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 NDNFQ8TB73 568 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 NSMCE2Q96MF7 247 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 NTN4Q9HB63 628 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 TREX1Q9NSU2 369 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 ATAD3AQ9NVI7 634 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 TCRBV5S2A0A599 114 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 CLDN25C9JDP6 229 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 PIRO00625 290 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 GMNNO75496 209 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 MYO1DO94832 1006 aa20.38■□□□□ 0.85
MAP1LC3B-206ENST00000564844 CYP4B1P13584 511 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms