RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 CHRNA6Q15825 494 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 LRRC8BQ6P9F7 803 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 FAM151BQ6UXP7 276 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 MAATS1Q7Z4T9 603 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 GKN2Q86XP6 184 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 SDR16C5Q8N3Y7 309 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 SPATA4Q8NEY3 305 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 PPHLN1Q8NEY8 458 aaKnown RBP15.86■□□□□ 0.13
RAB40C-208ENST00000564703 OR1E3Q8WZA6 343 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 GLYATL1Q969I3 302 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 TBATAQ96M53 351 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 KRT12Q99456 494 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 TUBB2BQ9BVA1 445 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 DUSP23Q9BVJ7 150 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 SUDS3Q9H7L9 328 aaPredicted RBP15.86■□□□□ 0.13
RAB40C-208ENST00000564703 CARS2Q9HA77 564 aaKnown RBP15.86■□□□□ 0.13
RAB40C-208ENST00000564703 TRIM39Q9HCM9 518 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 ZNHIT2Q9UHR6 403 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 KLF15Q9UIH9 416 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 CDC23Q9UJX2 597 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 NEU2Q9Y3R4 380 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 GPSM3Q9Y4H4 160 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 SLC30A1Q9Y6M5 507 aa15.86■□□□□ 0.13
RAB40C-208ENST00000564703 FFAR2O15552 330 aa15.85■□□□□ 0.13
RAB40C-208ENST00000564703 LDOC1O95751 146 aaPredicted RBP15.85■□□□□ 0.13
RAB40C-208ENST00000564703 CEACAM1P13688 526 aa15.85■□□□□ 0.13
RAB40C-208ENST00000564703 POLD2P49005 469 aa15.85■□□□□ 0.13
RAB40C-208ENST00000564703 C1orf61Q13536 156 aa15.85■□□□□ 0.13
RAB40C-208ENST00000564703 PTK6Q13882 451 aa15.85■□□□□ 0.13
RAB40C-208ENST00000564703 DHX34Q14147 1143 aaKnown RBP15.85■□□□□ 0.13
RAB40C-208ENST00000564703 ATP13A5Q4VNC0 1218 aa15.85■□□□□ 0.13
RAB40C-208ENST00000564703 PCID2Q5JVF3 399 aa15.85■□□□□ 0.13
RAB40C-208ENST00000564703 PIP4P1Q86T03 277 aa15.85■□□□□ 0.13
RAB40C-208ENST00000564703 TRIM74Q86UV6 250 aa15.85■□□□□ 0.13
RAB40C-208ENST00000564703 PHYKPLQ8IUZ5 450 aa15.85■□□□□ 0.13
RAB40C-208ENST00000564703 PPIL6Q8IXY8 311 aa15.85■□□□□ 0.13
RAB40C-208ENST00000564703 RBFAQ8N0V3 343 aa15.85■□□□□ 0.13
RAB40C-208ENST00000564703 SLC25A45Q8N413 288 aa15.85■□□□□ 0.13
RAB40C-208ENST00000564703 ZNF548Q8NEK5 533 aaPredicted RBP15.85■□□□□ 0.13
RAB40C-208ENST00000564703 DEFB124Q8NES8 71 aa15.85■□□□□ 0.13
RAB40C-208ENST00000564703 OR13C4Q8NGS5 318 aa15.85■□□□□ 0.13
RAB40C-208ENST00000564703 COX14Q96I36 57 aa15.85■□□□□ 0.13
RAB40C-208ENST00000564703 VPS35Q96QK1 796 aa15.85■□□□□ 0.13
RAB40C-208ENST00000564703 RANBP9Q96S59 729 aa15.85■□□□□ 0.13
RAB40C-208ENST00000564703 FRMD8Q9BZ67 464 aaPredicted RBP15.85■□□□□ 0.13
RAB40C-208ENST00000564703 IL22Q9GZX6 179 aa15.85■□□□□ 0.13
RAB40C-208ENST00000564703 ASB8Q9H765 288 aa15.85■□□□□ 0.13
RAB40C-208ENST00000564703 RMI1Q9H9A7 625 aa15.85■□□□□ 0.13
RAB40C-208ENST00000564703 FGF22Q9HCT0 170 aa15.85■□□□□ 0.13
RAB40C-208ENST00000564703 MRPL40Q9NQ50 206 aaKnown RBP15.85■□□□□ 0.13
RAB40C-208ENST00000564703 NLE1Q9NVX2 485 aaPredicted RBP15.85■□□□□ 0.13
RAB40C-208ENST00000564703 UCKL1Q9NWZ5 548 aa15.85■□□□□ 0.13
RAB40C-208ENST00000564703 VPS18Q9P253 973 aa15.85■□□□□ 0.13
RAB40C-208ENST00000564703 FKBPLQ9UIM3 349 aa15.85■□□□□ 0.13
RAB40C-208ENST00000564703 CNOT6Q9ULM6 557 aaKnown RBP15.85■□□□□ 0.13
RAB40C-208ENST00000564703 SLC17A4Q9Y2C5 497 aa15.85■□□□□ 0.13
RAB40C-208ENST00000564703 PCNX2A6NKB5 2137 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 TPP1O14773 563 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 UGT1A9O60656 530 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 SRP72O76094 671 aaKnown RBP15.84■□□□□ 0.13
RAB40C-208ENST00000564703 PRAMEF1O95521 474 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 IVLP07476 585 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 UGT1A6P19224 532 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 ITGALP20701 1170 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 UGT1A1P22309 533 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 UGT1A4P22310 534 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 UGT1A3P35503 534 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 UGT1A5P35504 534 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 PTGIRP43119 386 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 GNPDA1P46926 289 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 NOVA1P51513 510 aaKnown RBP15.84■□□□□ 0.13
RAB40C-208ENST00000564703 ZNF140P52738 457 aaPredicted RBP15.84■□□□□ 0.13
RAB40C-208ENST00000564703 ILF3Q12906 894 aaKnown RBP eCLIP15.84■□□□□ 0.13
RAB40C-208ENST00000564703 PEX6Q13608 980 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 GTF2H3Q13889 308 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 KCNJ11Q14654 390 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 TRIP6Q15654 476 aaKnown RBP15.84■□□□□ 0.13
RAB40C-208ENST00000564703 KCTD19Q17RG1 926 aaPredicted RBP15.84■□□□□ 0.13
RAB40C-208ENST00000564703 CCDC38Q502W7 563 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 LDLRAP1Q5SW96 308 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 MARK2Q7KZI7 788 aaKnown RBP15.84■□□□□ 0.13
RAB40C-208ENST00000564703 TAF8Q7Z7C8 310 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 MCUQ8NE86 351 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 CPT1BQ92523 772 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 GLMNQ92990 594 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 CAMK1GQ96NX5 476 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 ZCCHC2Q9C0B9 1178 aaKnown RBP15.84■□□□□ 0.13
RAB40C-208ENST00000564703 TCEAL2Q9H3H9 227 aaPredicted RBP15.84■□□□□ 0.13
RAB40C-208ENST00000564703 UGT1A7Q9HAW7 530 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 UGT1A10Q9HAW8 530 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 UGT1A8Q9HAW9 530 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 EVA1BQ9NVM1 165 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 NLGN3Q9NZ94 848 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 FTSJ1Q9UET6 329 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 CRLS1Q9UJA2 301 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 PCOLCE2Q9UKZ9 415 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 SUFUQ9UMX1 484 aa15.84■□□□□ 0.13
RAB40C-208ENST00000564703 CEP250Q9BV73 2442 aa15.83■□□□□ 0.12
RAB40C-208ENST00000564703 MAGEB16A2A368 324 aa15.83■□□□□ 0.12
RAB40C-208ENST00000564703 CCDC78A2IDD5 438 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms