RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 CD151P48509 253 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 TPMTP51580 245 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 KPNA2P52292 529 aaKnown RBP9.72□□□□□ -0.85
UBFD1-203ENST00000564106 POLR2LP62875 67 aaKnown RBP9.72□□□□□ -0.85
UBFD1-203ENST00000564106 TRAF2Q12933 501 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 MSLNQ13421 630 aaPredicted RBP9.72□□□□□ -0.85
UBFD1-203ENST00000564106 INSCQ1MX18 579 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 ACCSLQ4AC99 568 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 TAF1BQ53T94 588 aaPredicted RBP9.72□□□□□ -0.85
UBFD1-203ENST00000564106 AARS2Q5JTZ9 985 aaKnown RBP9.72□□□□□ -0.85
UBFD1-203ENST00000564106 RNF187Q5TA31 235 aaPredicted RBP9.72□□□□□ -0.85
UBFD1-203ENST00000564106 MBLAC2Q68D91 279 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 ZNF470Q6ECI4 717 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 SLC23A3Q6PIS1 610 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 AFTPHQ6ULP2 937 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 LAYNQ6UX15 382 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 KYAT3Q6YP21 454 aaKnown RBP9.72□□□□□ -0.85
UBFD1-203ENST00000564106 SDCCAG8Q86SQ7 713 aaPredicted RBP9.72□□□□□ -0.85
UBFD1-203ENST00000564106 PIP4P1Q86T03 277 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 TRIM42Q8IWZ5 723 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 UNC5BQ8IZJ1 945 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 C2CD4AQ8NCU7 369 aaPredicted RBP9.72□□□□□ -0.85
UBFD1-203ENST00000564106 OR13J1Q8NGT2 312 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 OR6P1Q8NGX9 317 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 MDM1Q8TC05 714 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 BCAS4Q8TDM0 211 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 PDCD6IPQ8WUM4 868 aaKnown RBP9.72□□□□□ -0.85
UBFD1-203ENST00000564106 TSPAN17Q96FV3 270 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 CHMP6Q96FZ7 201 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 TOE1Q96GM8 510 aaKnown RBP9.72□□□□□ -0.85
UBFD1-203ENST00000564106 LRIG1Q96JA1 1093 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 VPS39Q96JC1 886 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 SPACA7Q96KW9 195 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 ZNF778Q96MU6 729 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 TCF12Q99081 682 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 GPR22Q99680 433 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 OSBPL1AQ9BXW6 950 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 TM6SF2Q9BZW4 377 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 VPS11Q9H270 941 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 TMEM245Q9H330 911 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 IL21RQ9HBE5 538 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 NLE1Q9NVX2 485 aaPredicted RBP9.72□□□□□ -0.85
UBFD1-203ENST00000564106 ELOVL2Q9NXB9 296 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 WSB2Q9NYS7 404 aaPredicted RBP9.72□□□□□ -0.85
UBFD1-203ENST00000564106 SERGEFQ9UGK8 458 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 MID2Q9UJV3 735 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 ANKRD6Q9Y2G4 727 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 PKP3Q9Y446 797 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 PCDHB9Q9Y5E1 797 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 PCDHGC4Q9Y5F7 938 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 ACTL7AQ9Y615 435 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 SCN8AQ9UQD0 1980 aa9.72□□□□□ -0.85
UBFD1-203ENST00000564106 TTC24A2A3L6 582 aaPredicted RBP9.71□□□□□ -0.86
UBFD1-203ENST00000564106 H7C0S8 307 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 HTRA2O43464 458 aaPredicted RBP9.71□□□□□ -0.86
UBFD1-203ENST00000564106 UGT1A9O60656 530 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 ASMTLO95671 621 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 MT-CO1P00395 513 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 PRLP01236 227 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 APOA4P06727 396 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 DLDP09622 509 aaKnown RBP9.71□□□□□ -0.86
UBFD1-203ENST00000564106 COL6A2P12110 1019 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 CD59P13987 128 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 CREB1P16220 341 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 ARNTP27540 789 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 CRHR1P34998 444 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 RPA3P35244 121 aaPredicted RBP9.71□□□□□ -0.86
UBFD1-203ENST00000564106 PPARGP37231 505 aaPredicted RBP9.71□□□□□ -0.86
UBFD1-203ENST00000564106 SLC1A2P43004 574 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 LEPRP48357 1165 aaKnown RBP9.71□□□□□ -0.86
UBFD1-203ENST00000564106 NEK3P51956 506 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 ZNF140P52738 457 aaPredicted RBP9.71□□□□□ -0.86
UBFD1-203ENST00000564106 SLC12A2P55011 1212 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 POU4F1Q01851 419 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 FOXC1Q12948 553 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 BMPR2Q13873 1038 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 IHHQ14623 411 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 PDK4Q16654 411 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 CCDC153Q494R4 210 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 CARD16Q5EG05 197 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 ATXN7L2Q5T6C5 722 aaPredicted RBP9.71□□□□□ -0.86
UBFD1-203ENST00000564106 LVRNQ6Q4G3 990 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 RGS9BPQ6ZS82 235 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 SH2D5Q6ZV89 423 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 USP45Q70EL2 814 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 TRMT11Q7Z4G4 463 aaKnown RBP9.71□□□□□ -0.86
UBFD1-203ENST00000564106 CPLX4Q7Z7G2 160 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 FAM124AQ86V42 546 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 ZC3HC1Q86WB0 502 aaKnown RBP9.71□□□□□ -0.86
UBFD1-203ENST00000564106 TMPRSS6Q8IU80 811 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 RYBPQ8N488 228 aaPredicted RBP9.71□□□□□ -0.86
UBFD1-203ENST00000564106 OTUD6BQ8N6M0 293 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 GPR150Q8NGU9 434 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 C1orf216Q8TAB5 229 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 RAB3IL1Q8TBN0 382 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 MGARPQ8TDB4 240 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 TCP10LQ8TDR4 215 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 DENND1AQ8TEH3 1009 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 UCMAQ8WVF2 138 aa9.71□□□□□ -0.86
UBFD1-203ENST00000564106 CKAP2Q8WWK9 683 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms