RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 TMCO3Q6UWJ1 677 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 Q6ZPA2 131 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 BBS12Q6ZW61 710 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 ZNF572Q7Z3I7 529 aaPredicted RBP4.71□□□□□ -1.66
CDR2-203ENST00000563573 GPR149Q86SP6 731 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 TMEM150AQ86TG1 271 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 CHSY1Q86X52 802 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 TMC8Q8IU68 726 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 DENND1CQ8IV53 801 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 KLHL7Q8IXQ5 586 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 CMTM8Q8IZV2 173 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 PYROXD2Q8N2H3 581 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 MMGT1Q8N4V1 131 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 C12orf76Q8N812 135 aaPredicted RBP4.71□□□□□ -1.66
CDR2-203ENST00000563573 MYRIPQ8NFW9 859 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 OR5M3Q8NGP4 307 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 PROKR1Q8TCW9 393 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 TBC1D31Q96DN5 1066 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 CSPG4P5Q96PW8 444 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 PEBP4Q96S96 227 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 KRT12Q99456 494 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 CPPED1Q9BRF8 314 aaPredicted RBP4.71□□□□□ -1.66
CDR2-203ENST00000563573 SOX7Q9BT81 388 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 SLC46A2Q9BY10 475 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 ZYG11BQ9C0D3 744 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 BRD8Q9H0E9 1235 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 RAB6CQ9H0N0 254 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 LRRC19Q9H756 370 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 ZMAT4Q9H898 229 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 TDP1Q9NUW8 608 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 KLHL11Q9NVR0 708 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 HCFC1R1Q9NWW0 138 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 MTMR10Q9NXD2 777 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 CWC15Q9P013 229 aaKnown RBP4.71□□□□□ -1.66
CDR2-203ENST00000563573 CALCOCO1Q9P1Z2 691 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 TBC1D14Q9P2M4 693 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 PACSIN3Q9UKS6 424 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 SORCS3Q9UPU3 1222 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 MAPRE3Q9UPY8 281 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 PRKAB1Q9Y478 270 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 HEY1Q9Y5J3 304 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 CPQQ9Y646 472 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 HS3ST4Q9Y661 456 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 MTCH2Q9Y6C9 303 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 ZFP37Q9Y6Q3 630 aaPredicted RBP4.71□□□□□ -1.66
CDR2-203ENST00000563573 C2orf16Q68DN1 1984 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 SHROOM3Q8TF72 1996 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 LAMA3Q16787 3333 aa4.71□□□□□ -1.66
CDR2-203ENST00000563573 NUP205Q92621 2012 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 DOCK6Q96HP0 2047 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 NOTCH4Q99466 2003 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 CDH23Q9H251 3354 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 COL6A3P12111 3177 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 E2F8A0AVK6 867 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 CFAP69A5D8W1 941 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 DRGXA6NNA5 263 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 FAM72CH0Y354 149 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 LEFTY2O00292 366 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 SLC9A3R1O14745 358 aaPredicted RBP4.7□□□□□ -1.66
CDR2-203ENST00000563573 DNAJC6O75061 913 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 CLDN11O75508 207 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 NEBLO76041 1014 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 STC2O76061 302 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 PCDH8O95206 1070 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 GAS8O95995 478 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 IGLV3-27P01718 113 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 RBP3P10745 1247 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 GJA1P17302 382 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 FNTAP49354 379 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 CDH4P55283 916 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 EIF3EP60228 445 aaKnown RBP4.7□□□□□ -1.66
CDR2-203ENST00000563573 NTHL1P78549 312 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 DR1Q01658 176 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 OTUD4Q01804 1114 aaKnown RBP4.7□□□□□ -1.66
CDR2-203ENST00000563573 AP1B1Q10567 949 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 KLF1Q13351 362 aaPredicted RBP4.7□□□□□ -1.66
CDR2-203ENST00000563573 XRCC4Q13426 336 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 PAFAH1B3Q15102 231 aaKnown RBP4.7□□□□□ -1.66
CDR2-203ENST00000563573 PDK1Q15118 436 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 PPP1R7Q15435 360 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 TEAD2Q15562 447 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 TIGD2Q4W5G0 525 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 MPPE1Q53F39 396 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 MS4A13Q5J8X5 152 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 TEX35Q5T0J7 233 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 FAM72AQ5TYM5 149 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 OTUD1Q5VV17 481 aaPredicted RBP4.7□□□□□ -1.66
CDR2-203ENST00000563573 RAP1GAP2Q684P5 730 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 SLC9A4Q6AI14 798 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 FAM72DQ6L9T8 149 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 FBXL22Q6P050 247 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 DRICH1Q6PGQ1 229 aaPredicted RBP4.7□□□□□ -1.66
CDR2-203ENST00000563573 UNQ6494/PRO21346Q6UXR6 183 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 C4orf22Q6V702 233 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 RFX8Q6ZV50 586 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 CYP4V2Q6ZWL3 525 aaPredicted RBP4.7□□□□□ -1.66
CDR2-203ENST00000563573 PCGF5Q86SE9 256 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 FAM72BQ86X60 149 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 ZNF354CQ86Y25 554 aa4.7□□□□□ -1.66
CDR2-203ENST00000563573 LRRC49Q8IUZ0 686 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms