RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 AVL9Q8NBF6 648 aa18.51■□□□□ 0.55
NME3-204ENST00000563498 TEKT4Q8WW24 435 aa18.51■□□□□ 0.55
NME3-204ENST00000563498 STARD8Q92502 1023 aa18.51■□□□□ 0.55
NME3-204ENST00000563498 NCSTNQ92542 709 aa18.51■□□□□ 0.55
NME3-204ENST00000563498 HSPH1Q92598 858 aa18.51■□□□□ 0.55
NME3-204ENST00000563498 ABHD17AQ96GS6 310 aa18.51■□□□□ 0.55
NME3-204ENST00000563498 RIOK2Q9BVS4 552 aaKnown RBP18.51■□□□□ 0.55
NME3-204ENST00000563498 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.51■□□□□ 0.55
NME3-204ENST00000563498 ZNF71Q9NQZ8 489 aaPredicted RBP18.51■□□□□ 0.55
NME3-204ENST00000563498 LMBRD1Q9NUN5 540 aa18.51■□□□□ 0.55
NME3-204ENST00000563498 AIPL1Q9NZN9 384 aa18.51■□□□□ 0.55
NME3-204ENST00000563498 TBC1D29Q9UFV1 150 aa18.51■□□□□ 0.55
NME3-204ENST00000563498 ZNHIT2Q9UHR6 403 aa18.51■□□□□ 0.55
NME3-204ENST00000563498 KIR2DS5A0A0G2JLQ3 304 aa18.5■□□□□ 0.55
NME3-204ENST00000563498 A0A0G2JNG1 304 aa18.5■□□□□ 0.55
NME3-204ENST00000563498 A6NCN8 305 aa18.5■□□□□ 0.55
NME3-204ENST00000563498 KIR2DS3K7RE56 304 aa18.5■□□□□ 0.55
NME3-204ENST00000563498 DDX3XO00571 662 aaKnown RBP eCLIP18.5■□□□□ 0.553e-7■■■■■ 28.4
NME3-204ENST00000563498 POLR1CO15160 346 aaPredicted RBP18.5■□□□□ 0.55
NME3-204ENST00000563498 INPP4BO15327 924 aa18.5■□□□□ 0.55
NME3-204ENST00000563498 ASMTLO95671 621 aa18.5■□□□□ 0.55
NME3-204ENST00000563498 DLGAP3O95886 979 aa18.5■□□□□ 0.55
NME3-204ENST00000563498 ANKRD34CP0C6C1 535 aa18.5■□□□□ 0.55
NME3-204ENST00000563498 GP1BBP13224 206 aa18.5■□□□□ 0.55
NME3-204ENST00000563498 TCF4P15884 667 aa18.5■□□□□ 0.55
NME3-204ENST00000563498 OAS2P29728 719 aaKnown RBP18.5■□□□□ 0.55
NME3-204ENST00000563498 EPHB1P54762 984 aa18.5■□□□□ 0.55
NME3-204ENST00000563498 RPL26P61254 145 aaKnown RBP18.5■□□□□ 0.55
NME3-204ENST00000563498 NFATC2Q13469 925 aa18.5■□□□□ 0.55
NME3-204ENST00000563498 SEPT6Q14141 434 aa18.5■□□□□ 0.55
NME3-204ENST00000563498 PIGHQ14442 188 aaPredicted RBP18.5■□□□□ 0.55
NME3-204ENST00000563498 KIR2DS5Q14953 304 aa18.5■□□□□ 0.55
NME3-204ENST00000563498 IGFBP7Q16270 282 aa18.5■□□□□ 0.55
NME3-204ENST00000563498 STX1AQ16623 288 aa18.5■□□□□ 0.55
NME3-204ENST00000563498 CLEC17AQ6ZS10 378 aa18.5■□□□□ 0.55
NME3-204ENST00000563498 CHST15Q7LFX5 561 aaPredicted RBP18.5■□□□□ 0.55
NME3-204ENST00000563498 LYSMD3Q7Z3D4 306 aa18.5■□□□□ 0.55
NME3-204ENST00000563498 KDELC2Q7Z4H8 507 aa18.5■□□□□ 0.55
NME3-204ENST00000563498 UNC5BQ8IZJ1 945 aa18.5■□□□□ 0.55
NME3-204ENST00000563498 ESX1Q8N693 406 aa18.5■□□□□ 0.55
NME3-204ENST00000563498 SMIM14Q96QK8 99 aa18.5■□□□□ 0.55
NME3-204ENST00000563498 LYSMD1Q96S90 227 aa18.5■□□□□ 0.55
NME3-204ENST00000563498 PCDH18Q9HCL0 1135 aa18.5■□□□□ 0.55
NME3-204ENST00000563498 APMAPQ9HDC9 416 aa18.5■□□□□ 0.55
NME3-204ENST00000563498 RCOR3Q9P2K3 495 aaPredicted RBP18.5■□□□□ 0.55
NME3-204ENST00000563498 RPL26L1Q9UNX3 145 aaKnown RBP18.5■□□□□ 0.55
NME3-204ENST00000563498 PCYT1BQ9Y5K3 369 aaPredicted RBP18.5■□□□□ 0.55
NME3-204ENST00000563498 RELNP78509 3460 aa18.49■□□□□ 0.55
NME3-204ENST00000563498 OR5K4A6NMS3 321 aa18.49■□□□□ 0.55
NME3-204ENST00000563498 ATP1A1P05023 1023 aaKnown RBP18.49■□□□□ 0.55
NME3-204ENST00000563498 F3P13726 295 aa18.49■□□□□ 0.55
NME3-204ENST00000563498 STAT5AP42229 794 aa18.49■□□□□ 0.55
NME3-204ENST00000563498 NOP2P46087 812 aaKnown RBP18.49■□□□□ 0.55
NME3-204ENST00000563498 ITKQ08881 620 aa18.49■□□□□ 0.55
NME3-204ENST00000563498 MAML1Q92585 1016 aa18.49■□□□□ 0.55
NME3-204ENST00000563498 TDRD1Q9BXT4 1180 aaKnown RBP18.49■□□□□ 0.55
NME3-204ENST00000563498 ISCUQ9H1K1 167 aa18.49■□□□□ 0.55
NME3-204ENST00000563498 HAUS2Q9NVX0 235 aa18.49■□□□□ 0.55
NME3-204ENST00000563498 MYO1AQ9UBC5 1043 aa18.49■□□□□ 0.55
NME3-204ENST00000563498 AMACRQ9UHK6 382 aa18.49■□□□□ 0.55
NME3-204ENST00000563498 CNOT6Q9ULM6 557 aaKnown RBP18.49■□□□□ 0.55
NME3-204ENST00000563498 MN1Q10571 1320 aaPredicted RBP18.49■□□□□ 0.55
NME3-204ENST00000563498 TCN2P20062 427 aa18.48■□□□□ 0.55
NME3-204ENST00000563498 CA4P22748 312 aa18.48■□□□□ 0.55
NME3-204ENST00000563498 IHHQ14623 411 aa18.48■□□□□ 0.55
NME3-204ENST00000563498 DEFB109BQ30KR1 87 aa18.48■□□□□ 0.55
NME3-204ENST00000563498 LACTB2Q53H82 288 aaPredicted RBP18.48■□□□□ 0.55
NME3-204ENST00000563498 TXNRD3NBQ6F5E7 133 aa18.48■□□□□ 0.55
NME3-204ENST00000563498 PLXDC1Q8IUK5 500 aa18.48■□□□□ 0.55
NME3-204ENST00000563498 NIPA2Q8N8Q9 360 aa18.48■□□□□ 0.55
NME3-204ENST00000563498 FATE1Q969F0 183 aa18.48■□□□□ 0.55
NME3-204ENST00000563498 SIDT1Q9NXL6 827 aaKnown RBP18.48■□□□□ 0.55
NME3-204ENST00000563498 PRKAB1Q9Y478 270 aa18.48■□□□□ 0.55
NME3-204ENST00000563498 KCTD3Q9Y597 815 aa18.48■□□□□ 0.55
NME3-204ENST00000563498 OAS3Q9Y6K5 1087 aaKnown RBP18.48■□□□□ 0.55
NME3-204ENST00000563498 RGSL1A5PLK6 1076 aa18.47■□□□□ 0.55
NME3-204ENST00000563498 LILRA5A6NI73 299 aa18.47■□□□□ 0.55
NME3-204ENST00000563498 MATN3O15232 486 aa18.47■□□□□ 0.55
NME3-204ENST00000563498 CLDN7O95471 211 aa18.47■□□□□ 0.55
NME3-204ENST00000563498 PRLP01236 227 aa18.47■□□□□ 0.55
NME3-204ENST00000563498 ACP5P13686 325 aa18.47■□□□□ 0.55
NME3-204ENST00000563498 IL4RP24394 825 aa18.47■□□□□ 0.55
NME3-204ENST00000563498 GARSP41250 739 aaKnown RBP18.47■□□□□ 0.55
NME3-204ENST00000563498 CLCNKAP51800 687 aa18.47■□□□□ 0.55
NME3-204ENST00000563498 DSC2Q02487 901 aa18.47■□□□□ 0.55
NME3-204ENST00000563498 SLC25A11Q02978 314 aaKnown RBP18.47■□□□□ 0.55
NME3-204ENST00000563498 KLHL30Q0D2K2 578 aa18.47■□□□□ 0.55
NME3-204ENST00000563498 GALNT2Q10471 571 aa18.47■□□□□ 0.55
NME3-204ENST00000563498 HENMT1Q5T8I9 393 aaKnown RBP18.47■□□□□ 0.55
NME3-204ENST00000563498 E4F1Q66K89 784 aaPredicted RBP18.47■□□□□ 0.55
NME3-204ENST00000563498 TIGD7Q6NT04 549 aaPredicted RBP18.47■□□□□ 0.55
NME3-204ENST00000563498 FAM26EQ8N5C1 309 aa18.47■□□□□ 0.55
NME3-204ENST00000563498 FAM71BQ8TC56 605 aa18.47■□□□□ 0.55
NME3-204ENST00000563498 WDR24Q96S15 920 aa18.47■□□□□ 0.55
NME3-204ENST00000563498 CARD9Q9H257 536 aa18.47■□□□□ 0.55
NME3-204ENST00000563498 UCK1Q9HA47 277 aa18.47■□□□□ 0.55
NME3-204ENST00000563498 RTN4Q9NQC3 1192 aaKnown RBP18.47■□□□□ 0.55
NME3-204ENST00000563498 CPNE7Q9UBL6 633 aa18.47■□□□□ 0.55
NME3-204ENST00000563498 KCNK6Q9Y257 313 aa18.47■□□□□ 0.55
NME3-204ENST00000563498 CHKBQ9Y259 395 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms