RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 NDUFAF2Q8N183 169 aa16.66■□□□□ 0.26
HDGFL3-203ENST00000563404 CCDC112Q8NEF3 446 aa16.66■□□□□ 0.26
HDGFL3-203ENST00000563404 RTP4Q96DX8 246 aa16.66■□□□□ 0.26
HDGFL3-203ENST00000563404 CTRCQ99895 268 aa16.66■□□□□ 0.26
HDGFL3-203ENST00000563404 NAT10Q9H0A0 1025 aaKnown RBP16.66■□□□□ 0.26
HDGFL3-203ENST00000563404 RBM22Q9NW64 420 aaKnown RBP eCLIP16.66■□□□□ 0.26
HDGFL3-203ENST00000563404 IP6K2Q9UHH9 426 aa16.66■□□□□ 0.26
HDGFL3-203ENST00000563404 ZNHIT2Q9UHR6 403 aa16.66■□□□□ 0.26
HDGFL3-203ENST00000563404 RELNP78509 3460 aa16.65■□□□□ 0.26
HDGFL3-203ENST00000563404 A6NCN8 305 aa16.65■□□□□ 0.26
HDGFL3-203ENST00000563404 SMTNL1A8MU46 457 aa16.65■□□□□ 0.26
HDGFL3-203ENST00000563404 FADS2P1A8MWK0 482 aa16.65■□□□□ 0.26
HDGFL3-203ENST00000563404 HLA-DQB2P05538 268 aa16.65■□□□□ 0.26
HDGFL3-203ENST00000563404 PYGLP06737 847 aa16.65■□□□□ 0.26
HDGFL3-203ENST00000563404 ZNF165P49910 485 aa16.65■□□□□ 0.26
HDGFL3-203ENST00000563404 HHEXQ03014 270 aa16.65■□□□□ 0.26
HDGFL3-203ENST00000563404 NFATC2Q13469 925 aa16.65■□□□□ 0.26
HDGFL3-203ENST00000563404 TDRD12Q587J7 1177 aaKnown RBP16.65■□□□□ 0.26
HDGFL3-203ENST00000563404 FIGNQ5HY92 759 aa16.65■□□□□ 0.26
HDGFL3-203ENST00000563404 FAM182AQ5T1J6 154 aa16.65■□□□□ 0.26
HDGFL3-203ENST00000563404 DCAF12Q5T6F0 453 aa16.65■□□□□ 0.26
HDGFL3-203ENST00000563404 IYDQ6PHW0 289 aa16.65■□□□□ 0.26
HDGFL3-203ENST00000563404 CHST15Q7LFX5 561 aaPredicted RBP16.65■□□□□ 0.26
HDGFL3-203ENST00000563404 TIPARPQ7Z3E1 657 aaKnown RBP16.65■□□□□ 0.26
HDGFL3-203ENST00000563404 LPCAT1Q8NF37 534 aa16.65■□□□□ 0.26
HDGFL3-203ENST00000563404 OR10G6Q8NH81 332 aa16.65■□□□□ 0.26
HDGFL3-203ENST00000563404 AHCYL2Q96HN2 611 aaKnown RBP16.65■□□□□ 0.26
HDGFL3-203ENST00000563404 LYSMD1Q96S90 227 aa16.65■□□□□ 0.26
HDGFL3-203ENST00000563404 ASPSCR1Q9BZE9 553 aa16.65■□□□□ 0.26
HDGFL3-203ENST00000563404 KCNK6Q9Y257 313 aa16.65■□□□□ 0.26
HDGFL3-203ENST00000563404 A0A087X0T9 212 aa16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 LOC101059948A0A1B0GTJ6 334 aa16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 NKX2-8O15522 239 aa16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 DUX1O43812 170 aa16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 MMP2P08253 660 aa16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 FAM228BP0C875 321 aa16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 CCNCP24863 283 aa16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 POLE2P56282 527 aa16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 RAB15P59190 212 aa16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 MC2RQ01718 297 aa16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 SLC10A2Q12908 348 aaPredicted RBP16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 IQCB1Q15051 598 aa16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 ANKRD20A8PQ5CZ79 823 aa16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 CCDC122Q5T0U0 273 aa16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 HENMT1Q5T8I9 393 aaKnown RBP16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 WDR74Q6RFH5 385 aaPredicted RBP16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 PTRH1Q86Y79 214 aaKnown RBP16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 PQLC3Q8N755 202 aa16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 NCSTNQ92542 709 aa16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 FATE1Q969F0 183 aa16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 TSGA13Q96PP4 275 aa16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 ZMYND15Q9H091 742 aa16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 ADNPQ9H2P0 1102 aa16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 PCDH9Q9HC56 1237 aa16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 APMAPQ9HDC9 416 aa16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 SARS2Q9NP81 518 aaKnown RBP16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 VPS18Q9P253 973 aa16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 TTLL3Q9Y4R7 772 aa16.64■□□□□ 0.25
HDGFL3-203ENST00000563404 FLNCQ14315 2725 aa16.63■□□□□ 0.25
HDGFL3-203ENST00000563404 ACP5P13686 325 aa16.63■□□□□ 0.25
HDGFL3-203ENST00000563404 CES1P23141 567 aa16.63■□□□□ 0.25
HDGFL3-203ENST00000563404 GJC1P36383 396 aa16.63■□□□□ 0.25
HDGFL3-203ENST00000563404 PBX1P40424 430 aa16.63■□□□□ 0.25
HDGFL3-203ENST00000563404 SSR1P43307 286 aaKnown RBP16.63■□□□□ 0.25
HDGFL3-203ENST00000563404 SPINT3P49223 89 aa16.63■□□□□ 0.25
HDGFL3-203ENST00000563404 GBE1Q04446 702 aa16.63■□□□□ 0.25
HDGFL3-203ENST00000563404 TLE1Q04724 770 aa16.63■□□□□ 0.25
HDGFL3-203ENST00000563404 KCNAB2Q13303 367 aa16.63■□□□□ 0.25
HDGFL3-203ENST00000563404 IFI16Q16666 785 aaKnown RBP16.63■□□□□ 0.25
HDGFL3-203ENST00000563404 QPCTQ16769 361 aa16.63■□□□□ 0.25
HDGFL3-203ENST00000563404 TIGD7Q6NT04 549 aaPredicted RBP16.63■□□□□ 0.25
HDGFL3-203ENST00000563404 RAVER1Q8IY67 606 aaKnown RBP16.63■□□□□ 0.25
HDGFL3-203ENST00000563404 UNC5BQ8IZJ1 945 aa16.63■□□□□ 0.25
HDGFL3-203ENST00000563404 EID2BQ96D98 161 aa16.63■□□□□ 0.25
HDGFL3-203ENST00000563404 SLC45A3Q96JT2 553 aa16.63■□□□□ 0.25
HDGFL3-203ENST00000563404 TBC1D10AQ9BXI6 508 aa16.63■□□□□ 0.25
HDGFL3-203ENST00000563404 DNPEPQ9ULA0 475 aa16.63■□□□□ 0.25
HDGFL3-203ENST00000563404 PTPN13Q12923 2485 aa16.63■□□□□ 0.25
HDGFL3-203ENST00000563404 NAV2Q8IVL1 2488 aa16.62■□□□□ 0.25
HDGFL3-203ENST00000563404 C1orf232A0A0U1RR37 186 aa16.62■□□□□ 0.25
HDGFL3-203ENST00000563404 ZNF891A8MT65 544 aaPredicted RBP16.62■□□□□ 0.25
HDGFL3-203ENST00000563404 MYO1FO00160 1098 aa16.62■□□□□ 0.25
HDGFL3-203ENST00000563404 SNX2O60749 519 aa16.62■□□□□ 0.25
HDGFL3-203ENST00000563404 PPM1FP49593 454 aaPredicted RBP16.62■□□□□ 0.25
HDGFL3-203ENST00000563404 TAS2R40P59535 323 aa16.62■□□□□ 0.25
HDGFL3-203ENST00000563404 RPL26P61254 145 aaKnown RBP16.62■□□□□ 0.25
HDGFL3-203ENST00000563404 ZNF648Q5T619 568 aaPredicted RBP16.62■□□□□ 0.25
HDGFL3-203ENST00000563404 LYSMD3Q7Z3D4 306 aa16.62■□□□□ 0.25
HDGFL3-203ENST00000563404 NLGN4XQ8N0W4 816 aa16.62■□□□□ 0.25
HDGFL3-203ENST00000563404 NLGN4YQ8NFZ3 816 aaPredicted RBP16.62■□□□□ 0.25
HDGFL3-203ENST00000563404 ZNF564Q8TBZ8 553 aaPredicted RBP16.62■□□□□ 0.25
HDGFL3-203ENST00000563404 SYN2Q92777 582 aaPredicted RBP16.62■□□□□ 0.25
HDGFL3-203ENST00000563404 FAF2Q96CS3 445 aa16.62■□□□□ 0.25
HDGFL3-203ENST00000563404 TEFMQ96QE5 360 aaKnown RBP16.62■□□□□ 0.25
HDGFL3-203ENST00000563404 ZNF670Q9BS34 389 aa16.62■□□□□ 0.25
HDGFL3-203ENST00000563404 FAM83DQ9H4H8 585 aa16.62■□□□□ 0.25
HDGFL3-203ENST00000563404 ARFGAP3Q9NP61 516 aa16.62■□□□□ 0.25
HDGFL3-203ENST00000563404 FBXO8Q9NRD0 319 aa16.62■□□□□ 0.25
HDGFL3-203ENST00000563404 KLHL3Q9UH77 587 aa16.62■□□□□ 0.25
HDGFL3-203ENST00000563404 AMACRQ9UHK6 382 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms