RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 UNC13CQ8NB66 2214 aa28.07■■■□□ 2.08
NME3-203ENST00000563367 DMXL2Q8TDJ6 3036 aa28.07■■■□□ 2.08
NME3-203ENST00000563367 C5orf60A6NFR6 353 aa28.07■■■□□ 2.08
NME3-203ENST00000563367 NOBOXO60393 691 aa28.07■■■□□ 2.08
NME3-203ENST00000563367 ADRA1AP35348 466 aa28.07■■■□□ 2.08
NME3-203ENST00000563367 GDF10P55107 478 aa28.07■■■□□ 2.08
NME3-203ENST00000563367 RPS6KA1Q15418 735 aa28.07■■■□□ 2.08
NME3-203ENST00000563367 SEL1L2Q5TEA6 688 aa28.07■■■□□ 2.08
NME3-203ENST00000563367 CACTIN-AS1Q8N1I8 211 aa28.07■■■□□ 2.08
NME3-203ENST00000563367 BLOC1S5Q8TDH9 187 aa28.07■■■□□ 2.08
NME3-203ENST00000563367 ATG4AQ8WYN0 398 aa28.07■■■□□ 2.08
NME3-203ENST00000563367 ZCCHC14Q8WYQ9 949 aaKnown RBP28.07■■■□□ 2.08
NME3-203ENST00000563367 NAT6Q93015 286 aa28.07■■■□□ 2.08
NME3-203ENST00000563367 OR2M4Q96R27 311 aa28.07■■■□□ 2.08
NME3-203ENST00000563367 APOL2Q9BQE5 337 aa28.07■■■□□ 2.08
NME3-203ENST00000563367 TMEM121Q9BTD3 319 aa28.07■■■□□ 2.08
NME3-203ENST00000563367 GSDMCQ9BYG8 508 aa28.07■■■□□ 2.08
NME3-203ENST00000563367 CDH19Q9H159 772 aa28.07■■■□□ 2.08
NME3-203ENST00000563367 ABCG4Q9H172 646 aa28.07■■■□□ 2.08
NME3-203ENST00000563367 DPEP2Q9H4A9 486 aa28.07■■■□□ 2.08
NME3-203ENST00000563367 TRABDQ9H4I3 376 aa28.07■■■□□ 2.08
NME3-203ENST00000563367 RAD18Q9NS91 495 aa28.07■■■□□ 2.08
NME3-203ENST00000563367 RABGEF1Q9UJ41 708 aa28.07■■■□□ 2.08
NME3-203ENST00000563367 TMEM8BA6NDV4 472 aa28.06■■■□□ 2.08
NME3-203ENST00000563367 B4DGG1 531 aa28.06■■■□□ 2.08
NME3-203ENST00000563367 FGF1P05230 155 aa28.06■■■□□ 2.08
NME3-203ENST00000563367 HMGCLP35914 325 aa28.06■■■□□ 2.08
NME3-203ENST00000563367 ILF3Q12906 894 aaKnown RBP eCLIP28.06■■■□□ 2.08
NME3-203ENST00000563367 ZNF648Q5T619 568 aaPredicted RBP28.06■■■□□ 2.08
NME3-203ENST00000563367 RANBP10Q6VN20 620 aa28.06■■■□□ 2.08
NME3-203ENST00000563367 SLC13A5Q86YT5 568 aaPredicted RBP28.06■■■□□ 2.08
NME3-203ENST00000563367 TRAM1L1Q8N609 369 aa28.06■■■□□ 2.08
NME3-203ENST00000563367 CCDC3Q9BQI4 270 aa28.06■■■□□ 2.08
NME3-203ENST00000563367 ZSCAN5AQ9BUG6 496 aa28.06■■■□□ 2.08
NME3-203ENST00000563367 ARFGAP3Q9NP61 516 aa28.06■■■□□ 2.08
NME3-203ENST00000563367 HACD3Q9P035 362 aa28.06■■■□□ 2.08
NME3-203ENST00000563367 TAAR2Q9P1P5 351 aa28.06■■■□□ 2.08
NME3-203ENST00000563367 VPS18Q9P253 973 aa28.06■■■□□ 2.08
NME3-203ENST00000563367 AAR2Q9Y312 384 aaKnown RBP28.06■■■□□ 2.08
NME3-203ENST00000563367 PRKAB1Q9Y478 270 aa28.06■■■□□ 2.08
NME3-203ENST00000563367 NRDCO43847 1150 aa28.05■■■□□ 2.08
NME3-203ENST00000563367 DNAJC6O75061 913 aa28.05■■■□□ 2.08
NME3-203ENST00000563367 PRPSAP1Q14558 356 aa28.05■■■□□ 2.08
NME3-203ENST00000563367 KIF26BQ2KJY2 2108 aa28.05■■■□□ 2.08
NME3-203ENST00000563367 ZNF569Q5MCW4 686 aa28.05■■■□□ 2.08
NME3-203ENST00000563367 SLC30A9Q6PML9 568 aa28.05■■■□□ 2.08
NME3-203ENST00000563367 PDCD7Q8N8D1 485 aaKnown RBP28.05■■■□□ 2.08
NME3-203ENST00000563367 MDM1Q8TC05 714 aa28.05■■■□□ 2.08
NME3-203ENST00000563367 CCDC74AQ96AQ1 378 aa28.05■■■□□ 2.08
NME3-203ENST00000563367 ALS2CR12Q96Q35 445 aa28.05■■■□□ 2.08
NME3-203ENST00000563367 ZNF106Q9H2Y7 1883 aaKnown RBP28.05■■■□□ 2.08
NME3-203ENST00000563367 IL17CQ9P0M4 197 aa28.05■■■□□ 2.08
NME3-203ENST00000563367 ZMIZ1Q9ULJ6 1067 aa28.05■■■□□ 2.08
NME3-203ENST00000563367 KMT2BQ9UMN6 2715 aaPredicted RBP28.04■■■□□ 2.08
NME3-203ENST00000563367 BUD23O43709 281 aaKnown RBP28.04■■■□□ 2.08
NME3-203ENST00000563367 ZNF189O75820 626 aaPredicted RBP28.04■■■□□ 2.08
NME3-203ENST00000563367 GLT6D1Q7Z4J2 308 aa28.04■■■□□ 2.08
NME3-203ENST00000563367 GALNT13Q8IUC8 556 aa28.04■■■□□ 2.08
NME3-203ENST00000563367 KLHDC8BQ8IXV7 354 aa28.04■■■□□ 2.08
NME3-203ENST00000563367 ZNHIT2Q9UHR6 403 aa28.04■■■□□ 2.08
NME3-203ENST00000563367 TMPRSS11EQ9UL52 423 aa28.04■■■□□ 2.08
NME3-203ENST00000563367 METTL18O95568 372 aa28.03■■■□□ 2.08
NME3-203ENST00000563367 SPARCL1Q14515 664 aa28.03■■■□□ 2.08
NME3-203ENST00000563367 HLTFQ14527 1009 aaKnown RBP eCLIP28.03■■■□□ 2.08
NME3-203ENST00000563367 C14orf28Q4W4Y0 310 aa28.03■■■□□ 2.08
NME3-203ENST00000563367 ARHGEF18Q6ZSZ5 1173 aa28.03■■■□□ 2.08
NME3-203ENST00000563367 ZDHHC1Q8WTX9 485 aa28.03■■■□□ 2.08
NME3-203ENST00000563367 GLYATL1Q969I3 302 aa28.03■■■□□ 2.08
NME3-203ENST00000563367 PLEKHG4BQ96PX9 1271 aa28.03■■■□□ 2.08
NME3-203ENST00000563367 TLR10Q9BXR5 811 aa28.03■■■□□ 2.08
NME3-203ENST00000563367 CARD9Q9H257 536 aa28.03■■■□□ 2.08
NME3-203ENST00000563367 ATXN10Q9UBB4 475 aa28.03■■■□□ 2.08
NME3-203ENST00000563367 BPTFQ12830 3046 aa28.02■■■□□ 2.08
NME3-203ENST00000563367 TAF4O00268 1085 aa28.02■■■□□ 2.08
NME3-203ENST00000563367 LIASO43766 372 aa28.02■■■□□ 2.08
NME3-203ENST00000563367 USP12O75317 370 aa28.02■■■□□ 2.08
NME3-203ENST00000563367 SLC25A14O95258 325 aaPredicted RBP28.02■■■□□ 2.08
NME3-203ENST00000563367 CYP4F3Q08477 520 aa28.02■■■□□ 2.08
NME3-203ENST00000563367 MSLNQ13421 630 aaPredicted RBP28.02■■■□□ 2.08
NME3-203ENST00000563367 PTPRCAPQ14761 206 aa28.02■■■□□ 2.08
NME3-203ENST00000563367 PARP6Q2NL67 630 aa28.02■■■□□ 2.08
NME3-203ENST00000563367 CERCAMQ5T4B2 595 aa28.02■■■□□ 2.08
NME3-203ENST00000563367 PDPK2PQ6A1A2 396 aa28.02■■■□□ 2.08
NME3-203ENST00000563367 C17orf82Q86X59 251 aaPredicted RBP28.02■■■□□ 2.08
NME3-203ENST00000563367 TRIM58Q8NG06 486 aa28.02■■■□□ 2.08
NME3-203ENST00000563367 C1orf54Q8WWF1 131 aa28.02■■■□□ 2.08
NME3-203ENST00000563367 OR2AG1Q9H205 316 aa28.02■■■□□ 2.08
NME3-203ENST00000563367 CCDC86Q9H6F5 360 aaKnown RBP28.02■■■□□ 2.08
NME3-203ENST00000563367 IL26Q9NPH9 171 aa28.02■■■□□ 2.08
NME3-203ENST00000563367 PCDHB1Q9Y5F3 818 aa28.02■■■□□ 2.08
NME3-203ENST00000563367 CSO75390 466 aaKnown RBP28.01■■■□□ 2.07
NME3-203ENST00000563367 ZNF8P17098 575 aaPredicted RBP28.01■■■□□ 2.07
NME3-203ENST00000563367 ACTR1BP42025 376 aa28.01■■■□□ 2.07
NME3-203ENST00000563367 ACTR1AP61163 376 aa28.01■■■□□ 2.07
NME3-203ENST00000563367 OASLQ15646 514 aaKnown RBP28.01■■■□□ 2.07
NME3-203ENST00000563367 KCTD11Q693B1 232 aa28.01■■■□□ 2.07
NME3-203ENST00000563367 DENND5AQ6IQ26 1287 aa28.01■■■□□ 2.07
NME3-203ENST00000563367 ADGRG6Q86SQ4 1221 aa28.01■■■□□ 2.07
NME3-203ENST00000563367 PATE1Q8WXA2 126 aa28.01■■■□□ 2.07
NME3-203ENST00000563367 PPP1R2P1Q96PQ5 205 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms