RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 OLIG2Q13516 323 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 SKIDA1Q1XH10 827 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 ZXDCQ2QGD7 858 aaPredicted RBP4.76□□□□□ -1.65
SMG1-207ENST00000563235 MPPE1Q53F39 396 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 TTMPQ5BVD1 217 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 RALGPS1Q5JS13 557 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 GCNT6Q5T4J0 391 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 PSRC1Q6PGN9 363 aaPredicted RBP4.76□□□□□ -1.65
SMG1-207ENST00000563235 LAYNQ6UX15 382 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 NDUFAF7Q7L592 441 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 PHLDB2Q86SQ0 1253 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 ZDHHC21Q8IVQ6 265 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 ANKRD13CQ8N6S4 541 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 TMEM116Q8NCL8 245 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 ZCCHC14Q8WYQ9 949 aaKnown RBP4.76□□□□□ -1.65
SMG1-207ENST00000563235 PPP2R3CQ969Q6 453 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 ZBED3Q96IU2 234 aaPredicted RBP4.76□□□□□ -1.65
SMG1-207ENST00000563235 MAGED4Q96JG8 741 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 FCRL2Q96LA5 508 aaPredicted RBP4.76□□□□□ -1.65
SMG1-207ENST00000563235 NSMCE2Q96MF7 247 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 LRRC37BQ96QE4 947 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 PELOQ9BRX2 385 aaKnown RBP4.76□□□□□ -1.65
SMG1-207ENST00000563235 ADGRE3Q9BY15 652 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 GPR87Q9BY21 358 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 ZNF350Q9GZX5 532 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 MKRN2Q9H000 416 aaKnown RBP4.76□□□□□ -1.65
SMG1-207ENST00000563235 DRC3Q9H069 523 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 SOX17Q9H6I2 414 aaPredicted RBP4.76□□□□□ -1.65
SMG1-207ENST00000563235 RUBCNLQ9H714 662 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 IL21Q9HBE4 155 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 MMP25Q9NPA2 562 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 CATSPERZQ9NTU4 200 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 FBXO28Q9NVF7 368 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 RHBDL2Q9NX52 303 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 TAS2R7Q9NYW3 318 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 MKLN1Q9UL63 735 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 CDH7Q9ULB5 785 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 PLEKHM1Q9Y4G2 1056 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 CACNG2Q9Y698 323 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 STON1Q9Y6Q2 735 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 BRWD3Q6RI45 1802 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 A2MP01023 1474 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 CAMTA1Q9Y6Y1 1673 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 A0A087WZY1 265 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 FAM90A18PA6NE21 464 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 FAM90A16PA6NEW6 464 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 HELTA6NFD8 242 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 TMEM210A6NLX4 147 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 FAM90A9PA6NNJ1 464 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 FAM90A5PA8MXJ8 464 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 TNFRSF10AO00220 468 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 EFSO43281 561 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 SNRPAP09012 282 aaKnown RBP4.76□□□□□ -1.65
SMG1-207ENST00000563235 LINGO3P0C6S8 592 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 FAM90A15PP0C7V4 464 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 FAM90A14PP0C7W9 464 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 AREGP15514 252 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 SYN1P17600 705 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 LTBRP36941 435 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 FRKP42685 505 aaPredicted RBP4.76□□□□□ -1.65
SMG1-207ENST00000563235 PIK3CGP48736 1102 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 CDC20Q12834 499 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 PDCD4Q53EL6 469 aaKnown RBP4.76□□□□□ -1.65
SMG1-207ENST00000563235 TJAP1Q5JTD0 557 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 COLEC12Q5KU26 742 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 NOL9Q5SY16 702 aaKnown RBP4.76□□□□□ -1.65
SMG1-207ENST00000563235 DCST1Q5T197 706 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 TMEM88Q6PEY1 159 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 UNQ6494/PRO21346Q6UXR6 183 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 SLC51BQ86UW2 128 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 MFN1Q8IWA4 741 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 CCDC28AQ8IWP9 274 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 C10orf67Q8IYJ2 551 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 FNDC5Q8NAU1 212 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 OR56A3Q8NH54 315 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 RLN3Q8WXF3 142 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 ASCL2Q99929 193 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 C11orf70Q9BRQ4 267 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 WACQ9BTA9 647 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 EFHD1Q9BUP0 239 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 ZNF416Q9BWM5 594 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 PRRG3Q9BZD7 231 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 BLZF1Q9H2G9 400 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 TP63Q9H3D4 680 aaPredicted RBP4.76□□□□□ -1.65
SMG1-207ENST00000563235 MRPL39Q9NYK5 338 aaKnown RBP4.76□□□□□ -1.65
SMG1-207ENST00000563235 PSMC3IPQ9P2W1 217 aaPredicted RBP4.76□□□□□ -1.65
SMG1-207ENST00000563235 PALD1Q9ULE6 856 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 STAP1Q9ULZ2 295 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 PACSIN2Q9UNF0 486 aaPredicted RBP4.76□□□□□ -1.65
SMG1-207ENST00000563235 RREB1Q92766 1687 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 C17orf102A2RUQ5 167 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 HTR3EA5X5Y0 456 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 KDM4EB2RXH2 506 aaPredicted RBP4.76□□□□□ -1.65
SMG1-207ENST00000563235 H0Y858 1186 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 IGF2BP3O00425 579 aaKnown RBP eCLIP4.76□□□□□ -1.65
SMG1-207ENST00000563235 WNT9AO14904 365 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 MATN3O15232 486 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 PAPSS1O43252 624 aaPredicted RBP4.76□□□□□ -1.65
SMG1-207ENST00000563235 GPX5O75715 221 aa4.76□□□□□ -1.65
SMG1-207ENST00000563235 BMP10O95393 424 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms