RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 HADHAP40939 763 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 ATXN3P54252 364 aaPredicted RBP13.32□□□□□ -0.28
CDH1-204ENST00000562118 SRP54P61011 504 aaKnown RBP13.32□□□□□ -0.28
CDH1-204ENST00000562118 DR1Q01658 176 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 LAMB3Q13751 1172 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 PTPRCAPQ14761 206 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 KCTD19Q17RG1 926 aaPredicted RBP13.32□□□□□ -0.28
CDH1-204ENST00000562118 ATP13A5Q4VNC0 1218 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 CERCAMQ5T4B2 595 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 NLRP9Q7RTR0 991 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 GLRX5Q86SX6 157 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 PHACTR4Q8IZ21 702 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 TAB3Q8N5C8 712 aaPredicted RBP13.32□□□□□ -0.28
CDH1-204ENST00000562118 ZNF548Q8NEK5 533 aaPredicted RBP13.32□□□□□ -0.28
CDH1-204ENST00000562118 DDHD1Q8NEL9 900 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 OR13C4Q8NGS5 318 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 PDXPQ96GD0 296 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 LRRC61Q9BV99 259 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 KIFC1Q9BW19 673 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 IL22Q9GZX6 179 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 CAAP1Q9H8G2 361 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 TREX1Q9NSU2 369 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 APPL1Q9UKG1 709 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 PCOLCE2Q9UKZ9 415 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 TCAF1Q9Y4C2 921 aa13.32□□□□□ -0.28
CDH1-204ENST00000562118 OAS3Q9Y6K5 1087 aaKnown RBP13.32□□□□□ -0.28
CDH1-204ENST00000562118 CNOT1A5YKK6 2376 aaKnown RBP13.32□□□□□ -0.28
CDH1-204ENST00000562118 IGLV3-16A0A075B6K0 115 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 GLYATL1P3A0A0U1RQE8 302 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 SMAPO00193 183 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 TPP1O14773 563 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 STX7O15400 261 aaKnown RBP13.31□□□□□ -0.28
CDH1-204ENST00000562118 SRP72O76094 671 aaKnown RBP13.31□□□□□ -0.28
CDH1-204ENST00000562118 DKK1O94907 266 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 RASGRP1O95267 797 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 TPH1P17752 444 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 NPY2RP49146 381 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 BLKP51451 505 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 PPARDQ03181 441 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 BNIP3Q12983 259 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 NFATC2Q13469 925 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 ITGA9Q13797 1035 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 POU6F1Q14863 301 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 CHRNA6Q15825 494 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 RSPO4Q2I0M5 234 aaPredicted RBP13.31□□□□□ -0.28
CDH1-204ENST00000562118 ENPP7Q6UWV6 458 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 PPP1R21Q6ZMI0 780 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 NAXDQ8IW45 347 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 PPIL6Q8IXY8 311 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 AGGF1Q8N302 714 aaeCLIP13.31□□□□□ -0.28
CDH1-204ENST00000562118 GPBAR1Q8TDU6 330 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 SEC14L1Q92503 715 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 DNAJC1Q96KC8 554 aaKnown RBP13.31□□□□□ -0.28
CDH1-204ENST00000562118 SERPINB12Q96P63 405 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 SPATA16Q9BXB7 569 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 CLPBQ9H078 707 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 TCEAL2Q9H3H9 227 aaPredicted RBP13.31□□□□□ -0.28
CDH1-204ENST00000562118 RMI1Q9H9A7 625 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 XAB2Q9HCS7 855 aaKnown RBP13.31□□□□□ -0.28
CDH1-204ENST00000562118 BPIFA1Q9NP55 256 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 UCKL1Q9NWZ5 548 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 TRNAU1APQ9NX07 287 aaKnown RBP13.31□□□□□ -0.28
CDH1-204ENST00000562118 DNAJC28Q9NX36 388 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 KLQ9UEF7 1012 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 APOBEC3BQ9UH17 382 aaKnown RBP13.31□□□□□ -0.28
CDH1-204ENST00000562118 FKBPLQ9UIM3 349 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 CDV3Q9UKY7 258 aaKnown RBP13.31□□□□□ -0.28
CDH1-204ENST00000562118 ST14Q9Y5Y6 855 aa13.31□□□□□ -0.28
CDH1-204ENST00000562118 ARHGEF17Q96PE2 2063 aaPredicted RBP13.31□□□□□ -0.28
CDH1-204ENST00000562118 PIKFYVEQ9Y2I7 2098 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 FAM187AA6NFU0 413 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 GOLGA8CPA6NN73 597 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 LMO7DNF2Z398 122 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 H3BM21 787 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 SCAMP1O15126 338 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 TTI1O43156 1089 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 NUAK1O60285 661 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 SEC31AO94979 1220 aaKnown RBP13.3□□□□□ -0.28
CDH1-204ENST00000562118 PRAMEF1O95521 474 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 JUNDP17535 347 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 GRK6P43250 576 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 VPS41P49754 854 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 CKAP4Q07065 602 aaKnown RBP13.3□□□□□ -0.28
CDH1-204ENST00000562118 MORF4L2Q15014 288 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 SUZ12Q15022 739 aaKnown RBP13.3□□□□□ -0.28
CDH1-204ENST00000562118 PPP1R7Q15435 360 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 KHDC1Q4VXA5 237 aaKnown RBP13.3□□□□□ -0.28
CDH1-204ENST00000562118 PYCR3Q53H96 274 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 PCID2Q5JVF3 399 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 PRAMEF14Q5SWL7 426 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 TSTD2Q5T7W7 516 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 ALS2CLQ60I27 953 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 HIBCHQ6NVY1 386 aaPredicted RBP13.3□□□□□ -0.28
CDH1-204ENST00000562118 LVRNQ6Q4G3 990 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 PCGF5Q86SE9 256 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 ADGRG6Q86SQ4 1221 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 PHYKPLQ8IUZ5 450 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 KLHL7Q8IXQ5 586 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 RBFAQ8N0V3 343 aa13.3□□□□□ -0.28
CDH1-204ENST00000562118 FSTL5Q8N475 847 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms