RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	TLR8	Q9NR97	1041 aa	Known RBP	4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	PDGFC	Q9NRA1	345 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	PAPOLB	Q9NRJ5	636 aa	Known RBP	4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	INTS10	Q9NVR2	710 aa	Known RBP	4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	ZNHIT6	Q9NWK9	470 aa	Known RBP	4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	TMEM160	Q9NX00	188 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	RNF186	Q9NXI6	227 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	PTGFRN	Q9P2B2	879 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	KLHL13	Q9P2N7	655 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	CHORDC1	Q9UHD1	332 aa	Predicted RBP	4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	RASAL2	Q9UJF2	1139 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	NOSIP	Q9Y314	301 aa	Known RBP	4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	PKP3	Q9Y446	797 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	ZNF711	Q9Y462	761 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	KIF3A	Q9Y496	699 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	ANGPTL3	Q9Y5C1	460 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	N6AMT1	Q9Y5N5	214 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	MYH2	Q9UKX2	1941 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	CDK5RAP2	Q96SN8	1893 aa		4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	MYO5A	Q9Y4I1	1855 aa	Known RBP	4.22	□□□□□ -1.73
LRRC28-222	ENST00000561431	GPR75-ASB3	A0A0A6YYF3	556 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	TMEM247	A6NEH6	219 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	CXorf65	A6NEN9	183 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	SH2D7	A6NKC9	451 aa	Predicted RBP	4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	ZBTB43	O43298	467 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	PALM	O75781	387 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	UQCRFS1P1	P0C7P4	283 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	AVPR2	P30518	371 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	HOXA7	P31268	230 aa	Predicted RBP	4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	HADHA	P40939	763 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	MSH2	P43246	934 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	BTD	P43251	543 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	SOX2	P48431	317 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	MXI1	P50539	228 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	RRP1	P56182	461 aa	Known RBP	4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	IFI35	P80217	286 aa	Predicted RBP	4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	HSF1	Q00613	529 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	TFF2	Q03403	129 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	TCP10	Q12799	353 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	IL13RA2	Q14627	380 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	PPA1	Q15181	289 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	TTC39A	Q5SRH9	613 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	FAM171A1	Q5VUB5	890 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	C11orf88	Q6PI97	169 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	ZNF474	Q6S9Z5	364 aa	Predicted RBP	4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	NUP54	Q7Z3B4	507 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	MDGA2	Q7Z553	956 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	TMEM110	Q86TL2	294 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	AACS	Q86V21	672 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	CCDC25	Q86WR0	208 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	DZIP1	Q86YF9	867 aa	Known RBP	4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	OR8H3	Q8N146	312 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	DRAXIN	Q8NBI3	349 aa	Predicted RBP	4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	FAM110D	Q8TAY7	271 aa	Predicted RBP	4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	UTP15	Q8TED0	518 aa	Known RBP	4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	C2CD4C	Q8TF44	421 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	ZFAND2B	Q8WV99	257 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	ST8SIA4	Q92187	359 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	CNOT9	Q92600	299 aa	Known RBP	4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	OPTN	Q96CV9	577 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	NPL	Q9BXD5	320 aa	Predicted RBP	4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	OR10A4	Q9H209	315 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	TTC12	Q9H892	705 aa	Predicted RBP	4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	PREB	Q9HCU5	417 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	IL1RAPL2	Q9NP60	686 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	TMOD2	Q9NZR1	351 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	TBC1D29	Q9UFV1	150 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	VPS28	Q9UK41	221 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	DTX4	Q9Y2E6	619 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	MRPL11	Q9Y3B7	192 aa	Known RBP	4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	DOCK1	Q14185	1865 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	PHIP	Q8WWQ0	1821 aa		4.21	□□□□□ -1.74
LRRC28-222	ENST00000561431	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	DDTL	A6NHG4	134 aa	Predicted RBP	4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431		H0YC42	278 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	PPP6C	O00743	305 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	MCF2L	O15068	1137 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	ZBTB14	O43829	449 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	SOCS5	O75159	536 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	ENTPD3	O75355	529 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	TULP3	O75386	442 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	STAM2	O75886	525 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	TUBB4A	P04350	444 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	ARSA	P15289	507 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	CD9	P21926	228 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	KLRC2	P26717	231 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	TYK2	P29597	1187 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	ACTN2	P35609	894 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	GGT5	P36269	586 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	MTHFR	P42898	656 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	GPD2	P43304	727 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	ASMT	P46597	345 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	MVD	P53602	400 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	GSTO1	P78417	241 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	ZNF91	Q05481	1191 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	ZBTB16	Q05516	673 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	GALNT2	Q10471	571 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	SREBF2	Q12772	1141 aa		4.2	□□□□□ -1.74
LRRC28-222	ENST00000561431	FOXF2	Q12947	444 aa		4.2	□□□□□ -1.74

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