RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	SNX15	Q9NRS6	342 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	CATSPERZ	Q9NTU4	200 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	POLR3B	Q9NW08	1133 aa	Predicted RBP	7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	C2orf42	Q9NWW7	574 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	SLCO3A1	Q9UIG8	710 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	FBXO5	Q9UKT4	447 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	GRID1	Q9ULK0	1009 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	ERVW-1	Q9UQF0	538 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	PLLP	Q9Y342	182 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	NEUROG3	Q9Y4Z2	214 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	PCDHGA5	Q9Y5G8	931 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	TENM4	Q6N022	2769 aa		7.51	□□□□□ -1.21
TPM1-231	ENST00000561395	PLXND1	Q9Y4D7	1925 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395		A0A0J9YYE9	177 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	FAM95C	A0A1B0GW59	222 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	OR51F1	A6NGY5	319 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	CAPN8	A6NHC0	703 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	OTOL1	A6NHN0	477 aa	Predicted RBP	7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	C4orf47	A7E2U8	309 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	TCP11X1	B4DZS4	312 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	NDUFAB1	O14561	156 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	AURKA	O14965	403 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	HYAL3	O43820	417 aa	Predicted RBP	7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	GLRA3	O75311	464 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	TULP3	O75386	442 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	GOT2	P00505	430 aa	Known RBP	7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	TRBC1	P01850	177 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	SLC4A1	P02730	911 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	MPO	P05164	745 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	SRPRA	P08240	638 aa	Known RBP	7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	DLD	P09622	509 aa	Known RBP	7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	DHRS4L1	P0CG22	281 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	TAC1	P20366	129 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	OGN	P20774	298 aa	Known RBP	7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	TYK2	P29597	1187 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	GDI1	P31150	447 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	HOXA6	P31267	233 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	FOXN2	P32314	431 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	ABL2	P42684	1182 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	CCNH	P51946	323 aa	Predicted RBP	7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	TMPRSS15	P98073	1019 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	RAD51	Q06609	339 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	ILF2	Q12905	390 aa	Known RBP	7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	PTPRCAP	Q14761	206 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	SEPT7	Q16181	437 aa	Known RBP	7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	PDK4	Q16654	411 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	INSC	Q1MX18	579 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	LCE2D	Q5TA82	110 aa	Predicted RBP	7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	GRAMD4	Q6IC98	578 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	MRNIP	Q6NTE8	343 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	C19orf48	Q6RUI8	117 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	KYAT3	Q6YP21	454 aa	Known RBP	7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	DPY19L3	Q6ZPD9	716 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	RGS9BP	Q6ZS82	235 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	CDHR3	Q6ZTQ4	885 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395		Q6ZVU0	165 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	PTAR1	Q7Z6K3	402 aa	Predicted RBP	7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	LRRC34	Q8IZ02	419 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	RYBP	Q8N488	228 aa	Predicted RBP	7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	CPA6	Q8N4T0	437 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	OTUD6B	Q8N6M0	293 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	CHST14	Q8NCH0	376 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	ACVR1C	Q8NER5	493 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	OR4K2	Q8NGD2	314 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	OR4L1	Q8NH43	312 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	BCAS4	Q8TDM0	211 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	ZNF473	Q8WTR7	871 aa	Known RBP	7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	CYB5D2	Q8WUJ1	264 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	SORCS1	Q8WY21	1168 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	ECHDC3	Q96DC8	303 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	CDKN2AIPNL	Q96HQ2	116 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	TBATA	Q96M53	351 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	FAM111A	Q96PZ2	611 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	CCT8L2	Q96SF2	557 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	KCNK17	Q96T54	332 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	PAIP2	Q9BPZ3	127 aa	Known RBP	7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	CPEB1	Q9BZB8	566 aa	Known RBP	7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	SLC13A1	Q9BZW2	595 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	CIPC	Q9C0C6	399 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	C12orf65	Q9H3J6	166 aa	Known RBP	7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	SUV39H2	Q9H5I1	410 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	RABEP2	Q9H5N1	569 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	ZDHHC6	Q9H6R6	413 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	SUDS3	Q9H7L9	328 aa	Predicted RBP	7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	CAB39L	Q9H9S4	337 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	TRPV5	Q9NQA5	729 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	FBXO6	Q9NRD1	293 aa	Predicted RBP	7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	MARCH4	Q9P2E8	410 aa	Predicted RBP	7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	HECA	Q9UBI9	543 aa	Predicted RBP	7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	SLC39A10	Q9ULF5	831 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	PPIL1	Q9Y3C6	166 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	ZNF711	Q9Y462	761 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395	GPSM3	Q9Y4H4	160 aa		7.5	□□□□□ -1.21
TPM1-231	ENST00000561395		A0A096LPK6	155 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395		A0A1W2PQ67	120 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	TSPAN11	A1L157	253 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	TTC34	A8MYJ7	566 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395		H7C0S8	307 aa		7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	STX7	O15400	261 aa	Known RBP	7.49	□□□□□ -1.21
TPM1-231	ENST00000561395	CD3EAP	O15446	510 aa	Known RBP	7.49	□□□□□ -1.21

Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms