RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 OAZ2O95190 189 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 MATN4O95460 622 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 ZBTB11O95625 1053 aaPredicted RBP8.53□□□□□ -1.04
CCDC33-209ENST00000560565 CXCL14O95715 111 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 LDLRP01130 860 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 PRKCGP05129 697 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 ERVK-10P10266 1014 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 MBL2P11226 248 aaPredicted RBP8.53□□□□□ -1.04
CCDC33-209ENST00000560565 UGT1A6P19224 532 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 UGT1A1P22309 533 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 UGT1A4P22310 534 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 MPSTP25325 297 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 CA8P35219 290 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 UGT1A3P35503 534 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 UGT1A5P35504 534 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 LTBRP36941 435 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 HALP42357 657 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 OR1G1P47890 313 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 SLC11A1P49279 550 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 NDUFV1P49821 464 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 CLCN5P51795 746 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 NDST2P52849 883 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 NAGLUP54802 743 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 PKNOX1P55347 436 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 MS4A2Q01362 244 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 TSPY1Q01534 308 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 GBE1Q04446 702 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 PRKCQQ04759 706 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 SMARCB1Q12824 385 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 IL18R1Q13478 541 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 MTM1Q13496 603 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 NR1D2Q14995 579 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 TAF5Q15542 800 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 ATP6AP1Q15904 470 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 C15orf59Q2T9L4 293 aaPredicted RBP8.53□□□□□ -1.04
CCDC33-209ENST00000560565 RFX4Q33E94 735 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 PTCRAQ6ISU1 281 aaPredicted RBP8.53□□□□□ -1.04
CCDC33-209ENST00000560565 DDX53Q86TM3 631 aaKnown RBP8.53□□□□□ -1.04
CCDC33-209ENST00000560565 OSTM1Q86WC4 334 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 TMEM173Q86WV6 379 aaPredicted RBP8.53□□□□□ -1.04
CCDC33-209ENST00000560565 CENPSQ8N2Z9 138 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 MIER2Q8N344 545 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 MRPL43Q8N983 215 aaKnown RBP8.53□□□□□ -1.04
CCDC33-209ENST00000560565 C3orf58Q8NDZ4 430 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 PIK3C3Q8NEB9 887 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 TRPV3Q8NET8 790 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 TBC1D15Q8TC07 691 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 SLC35F5Q8WV83 523 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 LRTOMTQ8WZ04 291 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 KCTD13Q8WZ19 329 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 USP13Q92995 863 aaPredicted RBP8.53□□□□□ -1.04
CCDC33-209ENST00000560565 COG8Q96MW5 612 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 KLHL32Q96NJ5 620 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 CNTNAP3BQ96NU0 1288 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 CDCA3Q99618 268 aaPredicted RBP8.53□□□□□ -1.04
CCDC33-209ENST00000560565 PSD2Q9BQI7 771 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 KIFC1Q9BW19 673 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 DUSP16Q9BY84 665 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 CNTNAP3Q9BZ76 1288 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 MAGEB5Q9BZ81 275 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 ING2Q9H160 280 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 POLR1BQ9H9Y6 1135 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 ANLNQ9NQW6 1124 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 MAN1C1Q9NR34 630 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 AGPAT4Q9NRZ5 378 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 ABCD2Q9UBJ2 740 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 RALYQ9UKM9 306 aaKnown RBP8.53□□□□□ -1.04
CCDC33-209ENST00000560565 SLC39A10Q9ULF5 831 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 FZD10Q9ULW2 581 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 RUVBL2Q9Y230 463 aaKnown RBP8.53□□□□□ -1.04
CCDC33-209ENST00000560565 FAM50BQ9Y247 325 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 FAM32AQ9Y421 112 aaKnown RBP8.53□□□□□ -1.04
CCDC33-209ENST00000560565 NME7Q9Y5B8 376 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 DOCK4Q8N1I0 1966 aa8.53□□□□□ -1.04
CCDC33-209ENST00000560565 ANKRD11Q6UB99 2663 aaPredicted RBP8.53□□□□□ -1.04
CCDC33-209ENST00000560565 ZCWPW2A0A1B0GU75 182 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 C7orf72A4D263 438 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 OR6C75A6NL08 312 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 HIDE1A8MVS5 230 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 UBXN8O00124 270 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 EEF2KO00418 725 aaKnown RBP8.52□□□□□ -1.05
CCDC33-209ENST00000560565 SDHDO14521 159 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 LSM1O15116 133 aaKnown RBP8.52□□□□□ -1.05
CCDC33-209ENST00000560565 SLC22A1O15245 554 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 PHGDHO43175 533 aaKnown RBP8.52□□□□□ -1.05
CCDC33-209ENST00000560565 TBC1D4O60343 1298 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 B4GALT3O60512 393 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 ZMPSTE24O75844 475 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 SULT1C4O75897 302 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 IPO13O94829 963 aaKnown RBP8.52□□□□□ -1.05
CCDC33-209ENST00000560565 FKBP9O95302 570 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 NPR3P17342 541 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 POLR2EP19388 210 aaKnown RBP8.52□□□□□ -1.05
CCDC33-209ENST00000560565 LMO2P25791 158 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 PSMB4P28070 264 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 GSTM2P28161 218 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 IL12AP29459 219 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 NOS2P35228 1153 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 GRIK1P39086 918 aa8.52□□□□□ -1.05
CCDC33-209ENST00000560565 RPS9P46781 194 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms