RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 CFAP99D6REC4 459 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 H0Y8X5 98 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 AURKAO14965 403 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 FLRT2O43155 660 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 SRP72O76094 671 aaKnown RBP11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 SEC31AO94979 1220 aaKnown RBP11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 SLC25A14O95258 325 aaPredicted RBP11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 TTC4O95801 387 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 IVLP07476 585 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 GSTM1P09488 218 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 ALPPL2P10696 532 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 HK3P52790 923 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 GSTM4Q03013 218 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 ILF2Q12905 390 aaKnown RBP11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 GTF2H3Q13889 308 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 SEPT6Q14141 434 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 FZD2Q14332 565 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 SF3A2Q15428 464 aaKnown RBP11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 TSTD2Q5T7W7 516 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 ENPP7Q6UWV6 458 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 SNX20Q7Z614 316 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 SLC22A18ASQ8N1D0 253 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 MPP5Q8N3R9 675 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 DCLK2Q8N568 766 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 TAB3Q8N5C8 712 aaPredicted RBP11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 ZNF398Q8TD17 642 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 FUBP1Q96AE4 644 aaKnown RBP11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 SCARF2Q96GP6 870 aaPredicted RBP11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 CDKN2AIPNLQ96HQ2 116 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 SERPINB12Q96P63 405 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 KIFC1Q9BW19 673 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 TM7SF3Q9NS93 570 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 TRNAU1APQ9NX07 287 aaKnown RBP11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 DNAJC28Q9NX36 388 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 CD84Q9UIB8 345 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 ANAPC5Q9UJX4 755 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 VPS9D1Q9Y2B5 631 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 SLC17A4Q9Y2C5 497 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 ARL5AQ9Y689 179 aa11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 DNMT3AQ9Y6K1 912 aaPredicted RBP11.97□□□□□ -0.49
RABGGTA-215ENST00000560207 PIKFYVEQ9Y2I7 2098 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 FAM237BA0A1B0GVD1 139 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 TPP1O14773 563 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 PRAMEF1O95521 474 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 SLC4A1P02730 911 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 POLBP06746 335 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 CTSEP14091 401 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 TPH1P17752 444 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 IVDP26440 423 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 GRK6P43250 576 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 MAGEA3P43357 314 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 ARL4CP56559 192 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 SESN2P58004 480 aaPredicted RBP11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 SRP54P61011 504 aaKnown RBP11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 PRAMEP78395 509 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 CACNG1Q06432 222 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 NFATC2Q13469 925 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 CERCAMQ5T4B2 595 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 STPG1Q5TH74 334 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 HIBCHQ6NVY1 386 aaPredicted RBP11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 AFTPHQ6ULP2 937 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 DBX2Q6ZNG2 339 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 PRUNE1Q86TP1 453 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 GKN2Q86XP6 184 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 SPATS2Q86XZ4 545 aaKnown RBP11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 PLA2G15Q8NCC3 412 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 DDHD1Q8NEL9 900 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 GLMNQ92990 594 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 SMIM14Q96QK8 99 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 SLC32A1Q9H598 525 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 ASB8Q9H765 288 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 BPIFA1Q9NP55 256 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 SOX13Q9UN79 622 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 GPR34Q9UPC5 381 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 OR1A2Q9Y585 309 aa11.96□□□□□ -0.49
RABGGTA-215ENST00000560207 ASCC3Q8N3C0 2202 aaKnown RBP11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 K7ESM1 405 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 CDX4O14627 284 aaPredicted RBP11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 EIF3HO15372 352 aaKnown RBP eCLIP11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 RAD51CO43502 376 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 PIAS2O75928 621 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 USP1O94782 785 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 SOD1P00441 154 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 CDK4P11802 303 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 JUNDP17535 347 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 VCLP18206 1134 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 EPHA8P29322 1005 aaPredicted RBP11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 BNC1Q01954 994 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 C2orf54Q08AI8 447 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 ITIH4Q14624 930 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 PTPRRQ15256 657 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 CCDC6Q16204 474 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 HIF1AQ16665 826 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 ALS2CLQ60I27 953 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 DUPD1Q68J44 220 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 TCEAL6Q6IPX3 200 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 CASC4Q6P4E1 433 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 FAM151BQ6UXP7 276 aa11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 CAND1Q86VP6 1230 aaKnown RBP11.95□□□□□ -0.5
RABGGTA-215ENST00000560207 GALNT13Q8IUC8 556 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms